Polynucleobacter duraquae: CL55_00019910
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Entry
CL55_00019910 CDS
T04207
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pdq
Polynucleobacter duraquae
Pathway
pdq00300
Lysine biosynthesis
pdq00470
D-Amino acid metabolism
pdq01100
Metabolic pathways
pdq01110
Biosynthesis of secondary metabolites
pdq01120
Microbial metabolism in diverse environments
pdq01230
Biosynthesis of amino acids
Module
pdq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pdq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CL55_00019910
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CL55_00019910
Enzymes [BR:
pdq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CL55_00019910
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
AKD26324
UniProt:
A0A0E3V1P1
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All DBs
Position
1960416..1961318
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AA seq
300 aa
AA seq
DB search
MSTNLTRPARTLRFTKMHGAGNDFIVLNGIDQDLTNITREQWQKLAHRQLGIGADQILLV
EKATRPDADFRYRIFNSDGGEVEQCGNGSRCFVRFVIDQGLSTKNPLRVEVAHTVLILKS
HDDGQVEVDMGTPIFEHHQIPFNASDLASKQEFHEMLYALPIKAPAAHDSWIGVVSMGNP
HAVQVVGDIDSAPVLEEGPSIEKNPVFPKRVNAGYMQILNRHEIQLRVYERGAGETLACG
TGACAAVVSGIRRGLLDSPVKVRTRGGDLQIAWGGLINEVIQPVIMTGPAITVFEGEVKI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacgaatttaaccaggcctgcacgcacattacgctttaccaaaatgcatggtgca
ggcaatgacttcattgtgctcaatgggattgatcaagatctcaccaacatcacccgcgag
caatggcaaaaactagcgcaccgtcagcttggcattggcgccgatcaaattctgctcgtt
gaaaaagctacgcgccccgatgctgactttcgttatcgcatttttaattctgatggcggt
gaagttgagcaatgtggcaatggctcacgttgctttgtacgctttgtgatcgaccaaggc
ctttctacgaagaatcccttacgtgtagaagtggcccacactgttctcatcctgaagtct
catgatgatggtcaggtggaagtggatatgggtacgccgatttttgagcatcaccaaatt
ccttttaatgcgagcgacctagcaagtaagcaagagtttcatgaaatgctgtatgcgcta
cccattaaagctcctgccgcacacgacagctggatcggtgttgtctcgatgggcaatcct
catgcagtacaagtagtgggcgatatcgatagcgcgcctgtactcgaagagggtccatca
attgaaaaaaatcctgtatttccaaaacgcgtgaatgcaggctatatgcaaatcctgaat
cgccatgaaatccaattgcgcgtctatgagcgcggcgctggcgagactctcgcttgtggc
actggcgcatgcgctgcagtggtttcaggcattcgtcgtggcttgcttgactcaccggtg
aaggtgcgtacccgcgggggcgatttacaaattgcctggggcggcctcatcaatgaagtg
attcaacctgtgatcatgaccggtccagccattaccgtattcgaaggcgaggtaaaaatc
taa
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