Polynucleobacter duraquae: CL55_00020090
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Entry
CL55_00020090 CDS
T04207
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pdq
Polynucleobacter duraquae
Pathway
pdq00550
Peptidoglycan biosynthesis
pdq01100
Metabolic pathways
pdq01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pdq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CL55_00020090
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CL55_00020090
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdq01011
]
CL55_00020090
Enzymes [BR:
pdq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CL55_00020090
Peptidoglycan biosynthesis and degradation proteins [BR:
pdq01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CL55_00020090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AKD26342
UniProt:
A0A0E3ZLS7
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All DBs
Position
1976745..1978652
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AA seq
635 aa
AA seq
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MVSFKKPDLDSFQERIHIATLFVTVCFLLLVTRLVWLQIVSHTKYALLAESNRIALVPAP
ANRGLLIDRNGIVIGRNYSALTLDVNAEEVKGNVDELIDELSQIVLISPRDRRNFKRSLE
DSRKMGTFPLRSMLTEVETARFMVNRYRFPGVEIRARSFREYPYNELASHLIGYIGRASK
QDIERMQTEIDNSKASDPDALQTSFLPGIQYVGKIGIEQSYETVLRGRPGYDEVEITAGG
KPVRTLSSSPSVPGKNVVLSVDIKLQYLVEQLYGNFRGAFVAIEPETGDILAFVSKPNFN
PNDFVEGIDSVTWKELNESPQKPLYNRPLKGIYPPGSTYKPFMALAALETKKRTPSQTIS
DPGYFDFGNHTFRDDKKGGHGIVDMQKSIVESCDTYYYHLARDMGVNMMHDFMKPFGFGQ
ITGIDLQGESKGVLPSTEWKKNTFKKPEQQKWYEGETISLGIGQGYNAFTILQLAHGMAN
LANNGIVMKPHLVKAIEDPFTRNRTLTTPKESYRIDLVPENIEMIKKAMVEVNNSGTSAS
VFKGTGYQVGGKTGTAQVFSLNSKEYHHGSTAEFLRDHALYVAFAPAEKPTIVLAMVVEN
AGFGAQHAAPIARKALDFYLEGKWPKEIPEWKRAP
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggtttcttttaaaaaaccagatctcgactcgtttcaagagcgcattcatattgcgacc
ctgtttgtcaccgtctgtttcttattactagtgacgagattggtgtggctgcaaatagtg
agtcataccaaatacgctctacttgcagagagcaatagaatcgctttagttcccgcaccg
gcgaatcgcggtctattgatagaccgcaatggaatcgtgattggcagaaactattcggca
ctgaccttagatgtcaatgcggaagaagttaaaggcaatgttgatgagctgatcgacgag
ctctctcaaattgtattgatttctcctagagatcgaagaaatttcaagcgctcacttgaa
gattctcgcaaaatgggcacctttcccctccgatctatgctcaccgaagtggaaacagct
cgctttatggttaatcgctaccgctttccgggtgtcgagatacgcgcccgaagctttcga
gagtacccctacaacgagcttgcctcgcatctgattggctatattgggcgagcttctaag
caagacatcgagcgcatgcaaactgaaattgataactccaaagcgagtgatcctgatgcg
ctacaaacttcatttctgccgggcatccaatatgtggggaaaattggtatagagcaaagt
tacgaaacagtattgcgaggtaggccaggatatgatgaggtggagattactgcaggcggc
aaacccgtgcgcacactttctagctcaccatcggtgccaggtaaaaatgtggtcctttcg
gttgatatcaagttgcaatacttagttgagcaactgtatggaaattttagaggtgcattt
gttgcgatagagcccgagactggcgatatcttggcatttgtttctaagcccaactttaac
cccaatgattttgttgagggtatcgactcagtaacgtggaaagagctgaatgagtcgcca
caaaagccactgtataaccggccgcttaaaggtatttatccgccgggatcaacttacaaa
ccatttatggcgctagcagctttagaaacgaaaaagcggacaccatcacaaaccatctct
gatccaggttattttgattttggtaaccataccttccgtgatgataaaaaaggtgggcac
ggcattgttgatatgcaaaagtcgatcgttgagtcttgtgatacctactactaccatttg
gcgcgcgatatgggcgtcaacatgatgcatgacttcatgaaaccatttggctttggtcaa
attactggcattgacctacaaggtgaatcaaaaggtgtactgccatccaccgagtggaag
aaaaataccttcaaaaagccggagcagcaaaaatggtatgaaggtgaaactatttccttg
ggaattggtcagggctataacgcatttactattttgcagctagcccatggcatggccaat
ttagctaataacggcattgtgatgaagccgcatttagtcaaggcgattgaagaccccttc
acgagaaatcgcaccctgactacgcctaaggaaagttatcgaattgatctcgtacccgag
aatattgagatgattaagaaagcaatggtcgaggtaaataattctggaacctctgcatct
gttttcaaaggtactggataccaagttggcggtaagactggaacagcgcaggtattcagc
ttgaattcgaaagaatatcaccacggatctacagcagaatttttacgtgatcatgctttg
tatgttgcttttgcccctgcagaaaagccgacaatcgtccttgcgatggttgtagagaac
gcaggatttggtgcgcagcatgctgcaccgattgcgcgcaaagcgctagatttttatctt
gaaggtaaatggccaaaggagattcctgaatggaaaagagcgccataa
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