Polynucleobacter duraquae: CL55_00020450
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Entry
CL55_00020450 CDS
T04207
Name
(GenBank) TIGR03549 family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pdq
Polynucleobacter duraquae
Brite
KEGG Orthology (KO) [BR:
pdq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdq03009
]
CL55_00020450
Ribosome biogenesis [BR:
pdq03009
]
Prokaryotic type
ribosomal protein modification factors
CL55_00020450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Alsin_RLD
Motif
Other DBs
NCBI-ProteinID:
AKD26378
UniProt:
A0A0E3V2H0
LinkDB
All DBs
Position
complement(2006833..2009034)
Genome browser
AA seq
733 aa
AA seq
DB search
MEIKVNFLDKLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCD
TRNISTEHIRLSQNNIVDPENRYQQIFKIQVELPEDISATDRQGILRSIERCTVKKVVQE
GPEFVIEEVKNLDADAQTLLALRPDSNLSTYIAGKDLPLEQTIANMSGVLANLGIKIEIA
SWRNLIPNVWSLHIRDAHSPMCFTNGKGSTKESALASALGEYIERLSNNHFYAGAFWGEE
IANASFVHYPAERWFKPGPKNALPKEILDKYCLNIFNADGELRGSHLIDTNSGNGERGIC
SLPYMRQSDGETVYFPSNLIENLYVSNGMSAGNTLAEAQVQCLSEIFERAVKREILEREI
ALPDIPQEVLAKYPSILAGIQSLEEQGFPVLVKDASLGGVYPVMCVTLMNPRTGGVFASF
GAHPSLEVALERSLTELLQGRSLEGLNDLPPPTFISEAVTEPNNFVEHFIDSSGIVSWRF
FSARSDYDFVEWDFSGKSENSNEEEAATLFGILQSIGKEAYVAVYDQLGAIACRILVPGY
SEVYPIEDLVWDNINKALLFRADILNISNLDDAGLCALLERLENNELDEYGDIATLIGIE
FDENTPWGQLTVLELKLLIHLALKQHEEAHELVGSFLQYNDNTVERKLFYQALNAVLETV
LDDNLELDDYLVNFRRMFGSERMDAVVGSVDGTIRFYGLTPTSMKLEGLDRHHRLIDSYR
KIHAAREKNGNCD
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtggaaataaaggtcaattttctcgataagctacgccttgaagccaagtttgacgacttc
acggtgattgctgatcagcctatccgctataagggtgacggttcagccccggggcctttt
gattacttcttagcttcgtcagccttatgtgccgcttattttgtgaagttatattgtgat
acgcgcaatatctcaacagagcatattcgcctttctcaaaataatattgtcgatccagaa
aaccgttaccaacaaatttttaaaattcaagtagagcttccggaagacatttctgccacc
gatcgccagggtattttgcgctccattgagcgttgcacggtgaagaaagtggtacaagaa
ggcccagagtttgttattgaagaggttaaaaacttagatgcggatgctcaaactttattg
gctttaaggccagattcaaatttgagcacttacattgccggcaaagatttaccgctagaa
caaactattgccaatatgtctggtgtgttggctaatctaggaattaagatcgaaatcgct
tcgtggcgcaatttaatcccaaatgtatggtctttgcatattcgcgatgcacactcacca
atgtgctttaccaatggcaagggatctacgaaagaaagcgcacttgcttcagccttgggt
gagtatatcgagcgactgagcaacaaccatttctatgcgggcgcattctggggtgaagag
atcgctaacgcttcctttgttcattaccctgctgagcgctggtttaagccaggccctaaa
aatgccctgcctaaagaaatactggataagtactgtctcaatatttttaatgctgatggc
gagttgcgcgggtcacatttaattgacactaattctggtaatggcgagcgcggcatttgt
tcattgccttatatgcgccagtccgatggtgagacggtgtattttccttctaacctgatt
gaaaatctctatgtcagcaatggtatgagcgctggcaatacgctggctgaagctcaggtg
caatgtttatctgagatatttgagcgagcagtgaagcgtgaaattcttgaacgtgaaatt
gctttgccagatattccgcaggaagtgcttgcaaagtaccctagcatcttggcaggcatt
cagagtcttgaggaacagggcttcccagtattggtaaaggacgcatcactgggtggtgta
tatccagttatgtgcgttactctaatgaacccaagaacaggtggcgtgtttgcttcattc
ggtgctcatccaagtttagaggtggcattggagcggagtttgactgagctacttcagggg
cgtagcttggagggcctcaatgatttgcctccgcctacctttataagtgaagcggtcact
gagccaaataactttgttgaacactttattgattcaagtggcatcgtctcttggcgcttc
tttagtgcaagatcagactacgattttgttgagtgggatttttccggcaaaagtgaaaac
tcgaatgaagaagaggcggccaccttgttcggcattcttcagtctattggcaaagaagct
tacgttgcggtctatgaccagctaggagcaatcgcatgtcgaatcttagtgcctggctat
tctgaggtttatccaattgaagaccttgtttgggataacatcaataaagcgttgttgttt
cgcgccgatattttgaatatatccaatttggatgatgccggcttatgcgcactgcttgag
cgcttagaaaataatgagctagatgagtacggtgatatcgccacactgatcggtatcgag
tttgatgaaaatacgccctggggtcagctaacagtgttggagttaaagctactcattcat
cttgctttgaagcagcatgaagaggcccatgagctggtcggctctttccttcaatataac
gacaatacagtcgagcgtaaattgttttatcaggcattgaatgcagtgttagagacggta
ctagatgacaacttagagcttgatgactacctagttaactttcgtagaatgtttggtagc
gagagaatggatgctgtagtggggtccgtagatggaactattcgcttctatggtttaacc
cccacaagcatgaaactcgagggtctcgataggcatcaccgcttgattgatagctataga
aaaatacatgctgctagagaaaaaaatggtaattgtgactaa
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