Pseudomonas sp. ATCC 13867: H681_02115
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Entry
H681_02115 CDS
T02524
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pdr
Pseudomonas sp. ATCC 13867
Brite
KEGG Orthology (KO) [BR:
pdr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdr03009
]
H681_02115
Enzymes [BR:
pdr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
H681_02115
Ribosome biogenesis [BR:
pdr03009
]
Prokaryotic type
rRNA helicases
H681_02115
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
P-loop_SecA
ERCC3_RAD25_C
CMS1
Motif
Other DBs
NCBI-ProteinID:
AGI22305
UniProt:
M4XAC0
LinkDB
All DBs
Position
complement(467657..469033)
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AA seq
458 aa
AA seq
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MTTSAFSSLSLSADLLANLDSLGYREMTPIQAAALPAILKGRDLIAQAKTGSGKTAAFGI
GLLSPLNPRYFGCQALVLCPTRELADQVTKEIRRLARAADNIKVLTLCGGVPFGPQIGSL
EHGAHVVVGTPGRVQEHLRRGTLKLDGLNTLVLDEADRMLDMGFYDSIADIIGQLPARRQ
TLLFSATYPEGIGQLAAKFLKNPERVEVEALHDDSQIEQHFYEIDPKQRFDAVVRLLQHF
RPQSCVAFCHTRQQCMEVVEQLNARKISALALHGDLEQRERDQVLTLFANRSCSVLVATD
VAARGLDIAALEAVINVELSRDAQVHVHRIGRSGRAGEKGLALSLVTPAEASRAQAIEDL
QGAPLNWERIDFLKANDAPLLPPMTTLAIAGGRKDKLRPGDILGALTGDAGLKGTQVGKI
AIFDFQAFVAVERDCAKQALKHFNEGRIKGRSFKARIL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacctccgcattttccagcctttccctgtcggccgacctgctggcaaacctcgac
tccctcggctaccgcgagatgactccgatccaggctgccgccctgcctgcgatcctcaag
ggccgcgacctgatcgcccaggccaagaccggcagcggcaagaccgccgccttcggcatc
ggcctgctcagcccgctcaatccgcgctacttcggctgccaggcgctggtgctgtgcccg
acccgcgagttggccgaccaggtgaccaaggagatccgccgcctggcccgcgccgccgac
aacatcaaggtgctgaccctctgcggcggcgtgcccttcggcccgcagatcggctcgctg
gagcacggcgcccacgtggtggtcggcaccccgggccgggtgcaggagcacctgcgccgc
ggcaccctgaaactcgacggcctgaacaccctggtgctcgacgaagccgaccgcatgctc
gacatgggcttctacgacagcatcgccgacatcatcggccaactgcccgcgcgccggcag
accctgctgttctccgccacctaccccgaaggcatcggccagttggcggcgaagttcctg
aagaatcccgagcgcgtggaagtggaagcgctgcacgacgacagccagatcgaacagcac
ttctatgagatcgatccgaagcaacgcttcgatgcggtcgtacgcctgcttcagcatttc
cgcccgcaatcctgcgtcgccttctgtcatacccgccagcagtgcatggaagtggtggag
caactcaacgcccgcaagatttccgccctggccctgcacggcgacctggagcagcgcgag
cgcgaccaggtgctgaccctgttcgccaaccgcagttgcagcgtgctggtggccaccgac
gtggccgcgcgcgggctggacatcgccgcgctggaagcggtgatcaacgtcgaactgtcg
cgcgatgcgcaggtccacgtgcaccgcatcggccgtagcggccgcgccggcgagaagggc
ctggcgctgtcgctggtcacccccgccgaagccagccgcgcccaggccatcgaagacctg
cagggcgcgccgctgaactgggagcgcatcgacttcctcaaggccaacgacgccccgctg
ctgccgccgatgaccaccctggcgattgccggcgggcgcaaggacaagctgcgccccggc
gacatcctcggcgcgctgaccggcgacgccgggctcaagggcacccaggtcggcaagatc
gccatcttcgacttccaggccttcgtcgccgtggagcgcgactgcgccaagcaggcgctg
aagcacttcaacgaaggcaggatcaagggccgctcgttcaaggcgcgcatcctctga
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