KEGG   Pseudomonas sp. ATCC 13867: H681_03860
Entry
H681_03860        CDS       T02524                                 
Name
(GenBank) ClpB protein
  KO
K11907  type VI secretion system protein VasG
Organism
pdr  Pseudomonas sp. ATCC 13867
Pathway
pdr02025  Biofilm formation - Pseudomonas aeruginosa
pdr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pdr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    H681_03860
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    H681_03860
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pdr02044]
    H681_03860
Secretion system [BR:pdr02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   H681_03860
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_22 AAA_16 AAA_7 NACHT TniB Sigma54_activat nSTAND3 IstB_IS21 Clp_N AAA_25 NBD_SMAX1 EcoEI_R_C Hpr_kinase_C SLFN-g3_helicase
Other DBs
NCBI-ProteinID: AGI22654
UniProt: M4WSE4
LinkDB
Position
complement(834016..836598)
AA seq 860 aa
MINLDLQQLVQALDAETRRDLEGAAERCVARGGSKILVEDLLLALLERPQGLLQRALQDA
DVDAGELAAALVPRAESSASRNPVFAAELMQWLQDALLVANLELRESQIDQAALILALLR
NPMRYAGSHYQPLLARLNADRLRDFALAQKPEDGNAPASGKGESMLERFTHNLTRQARDG
KLDPVLCRDSAIRQMIDILARRRKNNPIVVGEAGVGKTAVVEGLAARIATGEVPHALQGV
ELLSLDMGLLQAGASVKGEFERRLKGVIEEVKASAKPIILFIDEAHTLIGAGAQAGGSDA
ANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPVQLHEPTVGEAVTILRGLAK
VYEASHGIYLRDDAVVAAAELSARYLAGRQLPDKAVDVLDTACARVRISLAAAPESLEKL
RGELAEGERQRQALRRDQEAGLSIDREALQALEARLEEAATQELELQQRWQQQRDLASEL
LDLRQQLAAARVDAERREQSAELEQRLHDVHASLRYAQEQERLVSFEVCPRLVSEVISHW
TGVPLSQLAREHNAKVASFATDLRQRVRGQEQAVQALDRAMRATAAGLNKPDAPVGVFLL
VGPSGVGKTETAIALADLLYGGERFLTTINMSEFQEKHTVSRLIGAPPGYVGYGEGGMLT
EAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDKGIANDGEGREIDFRNTLILMTSNLASE
RISALCADGQRPDAEDLEEAIRPALSRHFKPALLARMRVVPYYPVSGDVLRELVQLKLGR
LGERMQRRQLGFSHCQALVEHLAERCTRSESGARLIDQLMDAHLLPQIADRLLDAMAAGE
TLRQVHATLDSDARPVCEFS
NT seq 2583 nt   +upstreamnt  +downstreamnt
atgatcaacctcgacctgcaacaactcgtccaggcgctggacgccgaaacccgccgcgac
ctggaaggcgccgccgagcgctgcgtcgcccgtggcggcagcaagatcctcgtcgaggac
ctcctgctggccctgctggaacgcccgcaaggcctgctgcagcgcgccctgcaggacgcc
gacgtcgacgccggcgagctggccgccgccttggtgccgcgcgctgaaagcagcgcctcg
cgcaacccggtgttcgccgccgagctgatgcagtggctgcaggacgccctgctggtcgcc
aatctggaactgcgcgaaagccagatcgaccaggccgcgctgatcctcgccctgctgcgc
aacccgatgcgctatgccggcagccactaccagccgctgctggcacgcctgaacgcggac
cgcctgcgtgacttcgccctggcgcagaagcctgaggacggcaacgcgccggccagcggc
aagggcgagtcgatgctcgaacgcttcacccacaacctcacgcgccaggcccgcgacggc
aagctcgatccggtgctgtgccgggacagcgcgatccgccagatgatcgacatcctcgcc
cgccgccggaagaacaacccgatcgtggtcggcgaggccggggtcggcaagacggcggtg
gtcgaagggctggccgcgcggatcgctaccggcgaagtgccgcatgccttgcaaggcgtc
gagctgctgtcgctggacatgggcctgctgcaggccggcgccagcgtgaaaggcgaattc
gagcgccgcctcaagggcgtgatcgaggaagtgaaggcgtccgccaaaccgatcatcctg
ttcatcgacgaagcccacacgctgatcggcgcaggcgcccaggccggtggctcggatgcc
gccaacctgctcaagcccgcgctggcgcgcggcgaactgcgcaccatcgccgccaccacc
tgggcggagtacaagaagtacttcgagaaggacccggcgctggcccggcgcttccagccg
gtgcaactgcacgagcccacggtcggtgaggcagtcaccatcctgcgcgggctggcgaag
gtctacgaggccagccacggcatctacctgcgcgacgacgcggtggtcgccgccgcagaa
ctgtccgcccgctacctcgccggccgccaattgccagacaaagccgtcgacgtgctcgat
accgcctgcgctcgcgtgcgcatcagcctggccgccgcgccggaaagcctggagaaactg
cgcggcgaactggccgaaggcgagcgccagcgccaggcgctgcgccgcgaccaggaagca
gggctgagcatcgaccgggaagcactgcaagcactggaagcccggctcgaagaagccgcc
acccaggagctcgaattgcagcagcgctggcagcagcagcgcgacctcgctagcgaactg
ctcgatctgcgccagcaactggctgccgcccgtgtcgacgcagagcgccgggagcaaagc
gctgagctcgaacagcgcctgcacgacgtgcatgcctcgctgcgctatgcgcaggaacag
gaacgcctggtcagcttcgaagtctgcccacgactggtttccgaagtgatcagccactgg
acaggcgtaccgctgtcgcaactggcccgcgagcacaatgccaaggtcgccagcttcgcc
accgacctgcgccagcgtgtacgcggccaggagcaggcggtacaggcgctggaccgcgcc
atgcgcgccaccgctgccggcctgaacaagcccgatgcgccggtgggcgtgttcctgctg
gtcggccccagcggcgtcggcaagaccgagaccgccatcgccctggccgacctgctgtac
ggcggcgagcgcttcctcaccaccatcaacatgtccgagttccaggagaagcacaccgtc
tcgcgcctgatcggcgctcctccgggctacgtcggctacggcgagggcggcatgctcacc
gaggcggtgcggcagaagccctactcggtggtgctgctcgatgaggtggagaaggccgac
ccggacgtgctcaacctcttctaccagatcttcgacaagggcatcgccaacgatggcgaa
ggccgcgagatcgacttccgcaacacgctgatcctgatgacctccaacctcgccagcgag
cgcatctccgcactctgcgccgacggccagcgcccggacgccgaggacctggaagaagcc
atccggccggcgctcagccgccacttcaagccagccctgctggcgcgcatgcgcgtggtg
ccctactacccggtaagcggcgacgtgctgcgtgagctggtgcagctcaagctcggccgc
ctgggcgagcgcatgcagcgccgtcagctcggcttcagccactgccaggcactggtcgaa
cacctggccgaacgctgcacccggagtgagagcggcgcgcggctgatcgaccagttgatg
gacgcccacctgttgccacaaatcgccgaccgtctgctcgacgccatggccgccggcgag
accctgcgccaggttcacgccacgctggacagcgatgctcgtccggtctgcgagttcagt
tga

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