Pseudomonas sp. ATCC 13867: H681_04350
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Entry
H681_04350 CDS
T02524
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pdr
Pseudomonas sp. ATCC 13867
Pathway
pdr00260
Glycine, serine and threonine metabolism
pdr00460
Cyanoamino acid metabolism
pdr00630
Glyoxylate and dicarboxylate metabolism
pdr00670
One carbon pool by folate
pdr00680
Methane metabolism
pdr01100
Metabolic pathways
pdr01110
Biosynthesis of secondary metabolites
pdr01120
Microbial metabolism in diverse environments
pdr01200
Carbon metabolism
pdr01230
Biosynthesis of amino acids
pdr01240
Biosynthesis of cofactors
pdr04981
Folate transport and metabolism
Module
pdr_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pdr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
H681_04350 (glyA)
09102 Energy metabolism
00680 Methane metabolism
H681_04350 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
H681_04350 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
H681_04350 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
H681_04350 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
H681_04350 (glyA)
Enzymes [BR:
pdr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
H681_04350 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AGI22752
UniProt:
M4WVK9
LinkDB
All DBs
Position
complement(939176..940429)
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AA seq
417 aa
AA seq
DB search
MFSRDLTLARYDAELFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKQLFGADYANVQPHAGSQANAAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGITDAGLIDYDEVERLAVEHKPKMIVAGFSAYSQV
LDFARFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARKNEEIEKKLNSAVFPGAQGGPLEHVIAAKAVCFKEALQPEFKAYQQQVLKNAQTMASV
FIERGFDVVSGGTQNHLFLLSLIKQDITGKDADAALGRAFITVNKNSVPNDPRSPFVTSG
LRIGTPAVTTRGFKEAECRELAGWICDILTNMGDESVVDGVREKVKAICAKFPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgaccctcgcccgctacgatgccgaactcttcgccgcgatggag
caggaagcccagcgccaggaagagcacatcgagctcatcgcctccgagaactacaccagc
ccggcggtgatggaagcccagggttcggtgctgaccaacaagtacgccgaaggctacccg
ggcaagcgctactacggtggttgcgagtacgtcgacgttgtcgagcaactcgccatcgac
cgcgccaagcaactgttcggcgccgactacgccaacgtccagccgcacgccggctcccag
gccaacgccgccgtctacctggccctgctgtcggccggtgacaccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccagcgtctcctcctccggcaagctgtac
aacgccgttcagtacggcatcaccgacgccggcctgatcgactacgacgaagtcgagcgc
ctggccgtcgagcacaagccgaagatgatcgtcgccggcttctccgcctactcccaggtg
ctggacttcgcccgcttccgcgccatcgcggacaaggtcggtgcctacctgttcgtcgac
atggcccacgtggccggtctggtcgccgctggcgtctacccgaacccggtaccgttcgcc
gacgtggtcaccaccaccacccacaagaccctgcgcggcccgcgcggcggcctgatcctc
gctcgcaagaacgaagagatcgagaagaagctgaactccgccgtcttcccgggcgcccag
ggtggcccgctggagcatgtgatcgccgccaaggccgtgtgcttcaaggaggccctgcag
cccgagttcaaggcctaccagcagcaggtcctgaagaacgcccagaccatggccagcgtg
ttcatcgagcgcggcttcgacgtggtttccggcggtacccagaaccacctgttcctgctg
tccctgatcaagcaggacatcaccggtaaggacgccgacgccgccctgggtcgtgccttc
atcaccgtgaacaagaacagcgtgccgaacgatccgcgttccccgttcgtcacctccggc
ctgcgcatcggcacccccgccgtgaccacccgcggcttcaaggaagccgagtgccgcgag
ctggccggctggatctgcgacatcctgaccaacatgggcgacgagtccgtggtggacggc
gtgcgcgagaaggtcaaggccatctgcgccaagttcccggtgtacggcgcctaa
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