Pseudomonas sp. ATCC 13867: H681_04410
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Entry
H681_04410 CDS
T02524
Name
(GenBank) DNA/RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdr
Pseudomonas sp. ATCC 13867
Pathway
pdr03420
Nucleotide excision repair
pdr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H681_04410
03430 Mismatch repair
H681_04410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdr03400
]
H681_04410
Enzymes [BR:
pdr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H681_04410
DNA repair and recombination proteins [BR:
pdr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H681_04410
MMR (mismatch excision repair)
Other MMR factors
H681_04410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
Viral_helicase1
AAA_19
UvrD_C_2
DUF3053
KdpD
Motif
Other DBs
NCBI-ProteinID:
AGI22762
UniProt:
M4WVM0
LinkDB
All DBs
Position
959329..960507
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AA seq
392 aa
AA seq
DB search
MANELWIAGAGSGKTHKIIQDAIEVIDAGGRVLVVTYTTSNQAELRSRFVKVYGRSSDNF
VVKGLFSFYLEDLVRPYQNVVFPDRITTTAFTEHNPHLRPGTTKWLPNRGEKIKGVLNPL
HYLTSCKTKAYTGFLAKLATLIAKQTKNAPAKRLKDIYQRVFFDEVQDLVGWDYDVIKAL
SKVMPDSICCVGDFRQTIYTTTFGHKAPQTPVEKIEYFQGLKFHQHSLPRNRRCIQEICD
LSDTIHPGLYDKTVSEMKQIPDEVVHHYGAFVVKHSQVGEYIAAFKPQVLRWSSSMGNNY
LPPNLSCHTFGSSKGLGFDRVLIFSPEKHLKYLSGDGKAFDKDKTEESRNKLYVAITRAR
YSLAFVVEDELVVKMPLPLWGGAVQAAVAPVA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
ttggctaacgaactctggatcgcaggcgcaggatcgggcaaaacgcacaaaatcatccag
gacgccatcgaggtcatcgatgctggtggccgagtcttggttgttacctacaccacgagc
aatcaggctgagctgcgctctcgtttcgtcaaggtgtacggcaggagcagtgataatttt
gtcgtaaagggcctgttttctttctacctcgaagacttggtaaggccctaccaaaacgta
gtgtttcccgatcggatcacgactacagcattcactgagcacaatccccacttgagacct
ggtacgaccaagtggctacccaaccgaggagagaaaataaaaggagtgctgaaccctctg
cattatctcacctcttgcaagaccaaggcctatacaggtttcttggcaaagctggcgaca
ttgatcgcgaaacagacgaaaaacgctcctgccaagcggctgaaagacatctatcagcga
gtgttcttcgatgaagtccaggatctagtcggttgggattacgatgttattaaggcattg
agcaaggtgatgcctgactcaatttgctgcgttggcgattttcgtcagaccatctacacc
accactttcgggcacaaggcacctcagactccggtagaaaaaatcgaatatttccaaggc
ttaaaattccaccagcattcgctaccgaggaatcgtagatgcattcaggagatctgcgat
ctatccgacacgatacaccctggtctctatgataagactgtgtcagagatgaagcagatt
cctgacgaggtggtacatcactacggcgcatttgttgtcaagcattcccaggtgggcgag
tacattgccgcattcaagccccaggtcttgcgctggtcatcgtcgatgggtaacaactac
ttgccaccgaacttgtcctgtcacacttttggttctagcaaggggctaggttttgatcgg
gttttgatcttttccccggagaagcatctcaagtatctgtctggcgacggcaaggcgttt
gataaggataaaacggaagagtctcggaacaagctctatgtggccatcacccgggcccgc
tatagcttggctttcgtggtcgaggatgaacttgtagtcaagatgcctttgccgttatgg
ggtggggctgttcaggccgctgttgcacctgtggcttag
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