Pseudomonas sp. ATCC 13867: H681_05365
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Entry
H681_05365 CDS
T02524
Name
(GenBank) glmZ(sRNA)-inactivating NTPase
KO
K06958
RNase adapter protein RapZ
Organism
pdr
Pseudomonas sp. ATCC 13867
Brite
KEGG Orthology (KO) [BR:
pdr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdr03019
]
H681_05365
Messenger RNA biogenesis [BR:
pdr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
H681_05365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_33
AAA_22
Rad17
AAA_28
AAA_16
AAA_29
CoaE
ABC_tran
FtsK_SpoIIIE
RsgA_GTPase
SKI
DUF1826
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AGI22953
UniProt:
M4WS91
LinkDB
All DBs
Position
complement(1181956..1182813)
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AA seq
285 aa
AA seq
DB search
MRLIIISGRSGSGKSTALNVLEDNGFYCIDNLPASLLPDLAQRALLHTELLHPQVAVSID
ARNLPSQLQRFPELLQEARDKHIQCDVLYLDADDETLLKRFSETRRRHPLTSDSRSLAEA
IADEAYLLAPIADLADLKLNTTNLNLYQLRDVLKLRLLNKPELGTAFLVESFGFKRGMPV
DADLVFDVRCLPNPYWKPELREHTGLDADVQEYLAAQPDVEEMYQDILGYLNKWLPRFAA
SNRAYVTIAIGCTGGQHRSTYLAERIGKALKESLTNVQIRHRDLS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatcatcatcagcggacggtccggctcgggcaagagcaccgcactcaacgtg
ctcgaggacaacggtttctactgcatcgacaacctgcccgccagcctcctcccggacctg
gcgcaacgtgcgttgctgcacaccgaactgctgcacccgcaggtcgccgtctccatcgac
gcgcgcaacctgcccagccagctgcagcgcttccccgagttgctgcaggaagcccgcgac
aagcacatccagtgcgacgtgctgtacctcgatgccgatgacgagacgctgctcaagcgc
ttctccgagacgcgccggcgccacccgctgaccagcgacagtcgctcgctggccgaagcc
atcgccgacgaggcgtacctgctggcgccgatcgccgacctggccgatctcaagctcaac
accacgaacctgaacctctatcagctgcgcgacgtgctcaagctgcgcctcttgaacaaa
cccgaactgggtaccgccttcctggtcgagtccttcggcttcaagcgcggcatgccggtg
gacgccgacctggtgttcgacgtgcgctgcctgcccaatccgtactggaagcccgagctg
cgcgaacacaccgggctcgacgcggatgtccaggagtacctggccgcgcaacccgacgtc
gaggagatgtaccaggatatcctcggctacctgaacaagtggctgccgcgcttcgccgcg
agcaaccgggcctatgtcaccatcgccatcggctgtaccggtggccagcatcgctcgacc
tacctggccgaacgcatcggcaaggccctcaaggaaagcctcaccaacgtgcagattcgc
caccgcgacctgagctag
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