Pseudomonas sp. ATCC 13867: H681_05940
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Entry
H681_05940 CDS
T02524
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pdr
Pseudomonas sp. ATCC 13867
Pathway
pdr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H681_05940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdr03400
]
H681_05940
Enzymes [BR:
pdr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H681_05940
DNA repair and recombination proteins [BR:
pdr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H681_05940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Ank_KRIT1
Motif
Other DBs
NCBI-ProteinID:
AGI23068
UniProt:
M4WSJ1
LinkDB
All DBs
Position
1295260..1298727
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AA seq
1155 aa
AA seq
DB search
MSEQPLTPGLMVIHGNHPEALRDLLVQWMSLHPLGPLENEVILVQSNGIAQWLKLALGRD
VEEGGCGVTAALDVQLPAQFLWRAYRAALGRDEIPEVSLLDKGPLTWRLMRLLPTLLEQD
AFATLQRFLADDADLRKRHQLAERLADLFDQYQVYRADWLEDWSRGVDQLRLANGTVKEL
EADNRWQAALWRALLDDVGPEGLATSRAGVHGRFIERLKAAGHPLPNLPRRVVIFGISAM
PAQTVEALAVLARHAQVLLCVHNPCRHHWADIVADKDLLRHEYRRQRRRAGTPEPLSDDQ
QHQYAQPLLAAWGKQGRDYINLLDQYDDPDSYRARLGAVSNGRIDLFSEEAPRNLLGQLQ
DDILELRPISESREHWPALDPQADDSIRFHVAHSAQREVEILHDQLLARFDADPTLRPRD
VIVMVPDINPYAPHIEAVFGQLSRDDKRFIPYTLADQGQRGREPLLVALEHLLRLPDSRF
AVSEILDLLDVAALRERFGLAEAELPLLRRWIDGAGVRWGLDGQQRERLGLPAAAEANSW
RFGLRRMLLGFAVGEGEAFQGIQPYAEIGGLDAAALGPLAGLLGALEQACSSLAEEIAPQ
LWAERLRALLDAFFRVTDDHDELLREKLLGLLDDWLQTCEYAGFSDPVPLSVVREAWLGG
LDAGGLNQRFLAGAVSFCTLMPMRAIPFQVVCLLGMNDGDYPRPQSPLDFDLMRNDYRPG
DRSRREDDRYLLLEALLSARRQLYVSWVGRSIRDNSERPPSVLIGQLRDHLADGWRRADG
GDLLHGLTLEHPLQPFSRAYFAGAPGQGVDGLYTYAREWRDVHHEHDAETDDTPLPPLAL
DAPIGLRVLADFLANPVGAFFLQRLKVRFAEQQLTSQDEEPFELNGLDVWQLQFELCERM
RPWVEQHWQDDRLATQLSEQVERLRREGRLPLAAFGEFSAQSLVAPLHDLLARYREQLEH
WSQVEDEQRELGHVHAGIELADWLGGLRRNAAGQLASLQLVSGKLHEGRGYKWHGLVRPW
VRHLALQLCGEPVTSVLVGLTGTLELPPLPAEQARAELNGLMDAWFQGMSRPLPVACKTA
FAWLAAGVDEDRARREAAKRYDGGYNLSGEAASSAALARVYPDFARLNAGETFGAWAEAL
YGPLFEILQRKEDAA
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcagccactgacccccggcctgatggtgatccacggcaaccatccggaagcg
ctgcgcgacctgctggtgcagtggatgagcctgcacccgctggggccgctggagaacgaa
gtcatcctcgtgcagagcaacggcatcgcccagtggctgaagctggcgctgggccgcgat
gtggaggagggcggctgcggtgtgaccgccgcgctcgacgtgcagttgcccgcgcagttt
ctctggcgcgcctatcgcgcggccctggggcgcgacgagattcccgaggtttcgctgctc
gacaagggcccgctgacctggcgcctgatgcgtctgctgccgactttgctggagcaggac
gcgttcgccaccctgcagcgcttcctcgccgacgacgccgacctgcgcaagcgccatcaa
ctggccgagcgcctggccgacctgttcgaccagtaccaggtctaccgcgccgactggctg
gaggactggagccgtggcgtcgaccagttgcgcctggccaacggcaccgtgaaggagctg
gaagccgacaatcgctggcaggccgcgctgtggcgcgcgctgctcgatgacgtcggcccc
gaaggcctggccaccagccgcgccggcgtgcacggacgcttcatcgagcgcctcaaggcc
gccgggcatccgctgccgaacctgccgcgccgggtcgtgatattcggcatctccgccatg
ccggcgcagaccgtcgaagccctcgccgtactggcgcgccatgcccaggtgctgctctgc
gtgcacaacccctgccgtcaccactgggccgacatcgttgccgacaaggacctgctgcgc
cacgaataccgccgccagcgccgccgcgccggcaccccggaaccgctcagcgacgaccag
caacaccagtacgcccagccgctgctggccgcctggggcaagcagggccgcgactacatc
aacctgctcgaccagtacgacgacccggacagctaccgcgcgcgcctgggcgcggtgagc
aacgggcgcatcgacctgttcagcgaggaggcgccgcgcaacctgctcggccaactgcag
gacgacatcctcgaactgcgtcccatcagcgagagccgtgaacactggccggcgctcgat
ccgcaggccgacgactcgatccgcttccacgtcgcccacagcgcccagcgggaagtggaa
atcctccacgaccagctgctcgcccgcttcgacgccgacccgacgctacgcccgcgcgac
gtgatcgtcatggtcccggacatcaacccctacgcgccgcacatcgaagccgtgttcggc
caactgtcgcgcgacgacaaacgcttcatcccctacaccctcgccgaccagggccagcgt
ggccgcgagccgctgctggtcgcgctggagcacttgctgcgcctgcccgacagccgtttc
gccgtgagcgaaatcctcgacctgctggacgtggcggccctgcgcgagcgcttcggcctg
gccgaggcggagctgccgctgctgcggcgctggatcgatggcgccggcgtgcgctggggc
ctcgacggccagcaacgcgaacgcctcggcctgcccgccgccgccgaggccaacagctgg
cgcttcggcctgcggcgcatgctgctgggctttgcggtgggcgagggcgaggccttccag
ggcatccagccctacgcggaaatcggcgggctcgacgccgccgcgctcggcccgctggcc
gggttgctcggcgccctggagcaggcctgctccagcctcgccgaggaaatcgcgccgcag
ctctgggcggagcgcctgcgggcactgctcgatgccttcttccgcgtcaccgacgaccac
gatgagctgctgcgggagaaactgctgggcttgctcgatgactggttgcagacctgcgaa
tacgccggtttcagcgatccggtaccgctctcggtggtgcgcgaggcttggcttggcggc
ctggatgcgggcggtctgaaccagcgtttcctcgccggcgcggtgagcttctgcaccctg
atgccgatgcgcgcgattcccttccaggtggtctgcctgctgggcatgaacgacggtgac
tacccgcgcccgcaatcgccgctggacttcgacctgatgcgcaacgactaccgccccggc
gaccgctcgcgccgcgaggacgaccgctacctgctgctcgaggcgctgctctcggcgcgg
cgccagctctacgtcagctgggtcgggcggagcatccgcgacaacagcgagcggccgccc
tcggtgctgatcggccaactgcgcgatcacctcgccgacggctggcggcgcgccgatggc
ggtgacctgctgcatggcctgaccctggaacatccgctgcaacccttcagccgcgcctac
tttgccggcgcgccgggccagggtgtggatggcctgtacacttacgcccgtgaatggcgc
gacgtgcaccatgagcacgacgccgagacggacgacacgccactgccgccgctggcgctc
gatgcgcccatcggcctgcgcgtgctggccgacttcctcgccaatccggtcggcgcgttc
ttcctccagcgactcaaggtgcgcttcgccgagcaacagctcaccagccaggatgaagag
ccgttcgaactcaatgggctggatgtctggcaactgcaattcgagctctgcgagcgcatg
cgcccgtgggttgagcagcactggcaggacgatcgactggccacgcaactgagcgaacag
gtggagcgcctgcgccgcgaaggccgtctgccgctggcggcctttggcgagttctccgcc
cagtcgctggtggcgccgctgcatgacctgctggcgcgctaccgcgaacaactggagcac
tggtcgcaggtcgaggacgagcaacgtgaactcggccacgtccatgccggcatcgagctg
gccgactggctcggcggcctgcgccgcaacgccgctggccagcttgccagcctgcaactg
gtcagcggcaagctccatgaaggccggggctacaaatggcatggactggtgcgtccctgg
gtgcgtcacctcgcgctgcaactgtgcggtgagccggtgaccagcgtgctggtcggtctc
accggcaccctggagctgccgccgctgccggcggaacaggcccgtgccgaactcaatggc
ctgatggatgcctggttccagggcatgagccggccgctgccggtggcctgcaagaccgct
tttgcctggctggcggccggcgtggatgaggaccgcgccaggcgcgaggctgccaagcgc
tatgacggcggctacaacctcagcggcgaggcggcgtcctcggcggcgctggcgcgggtg
tacccggacttcgcccgcctgaatgccggcgaaacctttggcgcctgggccgaagcgctc
tacggaccgttgttcgaaatactccagcgcaaggaggacgccgcatga
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