Pseudomonas sp. ATCC 13867: H681_07835
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Entry
H681_07835 CDS
T02524
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pdr
Pseudomonas sp. ATCC 13867
Brite
KEGG Orthology (KO) [BR:
pdr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdr03009
]
H681_07835 (rimO)
Enzymes [BR:
pdr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
H681_07835 (rimO)
Ribosome biogenesis [BR:
pdr03009
]
Prokaryotic type
ribosomal protein modification factors
H681_07835 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
YajR_YAM
DUF4249
Peptidase_A4
Motif
Other DBs
NCBI-ProteinID:
AGI23443
UniProt:
M4WTK0
LinkDB
All DBs
Position
complement(1702915..1704237)
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AA seq
440 aa
AA seq
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MSTATPKVGFVSLGCPKATVDSERILTQLRMEGYEIVPTYQDADVVVVNTCGFIDSAKAE
SLDAIGEAIAENGKVIVTGCMGVAEDSIRDVHPSVLAVTGPQQYEQVVNAVHEVIPPKAE
HNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLSEAQRL
VKAGVKELLVISQDTSAYGVDLKYKMDFWDGQPVKTRMLELCQALSAMGVWVRLHYVYPY
PNVDDVIPLMAEGKLLPYLDIPFQHASPKVLKPMKRPAFEDKTLARIKKWREICPELTIR
STFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLDVVPDDIKQDRW
ERFMAHQQAISAARLQLKIGKEIDVLIDEVDDEGAVGRSYADAPEIDGAVYIDSFDVKPG
DKVRVRITDADEYDLWAELV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgccacacccaaagtcggattcgtaagccttggttgcccgaaggccacggtc
gattccgaacgcatcctcacccagctgcgcatggaagggtacgaaatcgtccccacctac
caggacgcagacgtggtagtggtgaacacctgcggcttcatcgacagcgccaaggccgag
tccctggacgccatcggcgaagccatcgccgagaacggcaaggtgatcgtcaccggctgc
atgggcgtcgccgaagacagcatccgcgacgtgcaccccagcgtgctggccgtgaccggc
ccgcagcagtacgagcaggtggtcaatgccgtccacgaggtgatcccacccaaggccgag
cacaacccgctgatcgacctggtgccgccgcagggcatcaagctgaccccacgtcactac
gcctacctgaagatttccgaaggctgcaaccacagctgcagcttctgcatcatcccgtcc
atgcgcggcaagctggtcagccgcccggtcggcgacgtgctcagcgaagcccagcgcctg
gtcaaggccggcgtcaaggaactgctggtgatatcccaggacaccagcgcctacggcgtc
gacctgaagtacaagatggacttctgggacggccagccggtcaagacccgcatgctggag
ctatgccaggcgctctccgcgatgggcgtgtgggtacgcctgcactacgtctacccgtac
cccaacgtcgacgacgtgatcccgctgatggccgagggcaagttgctgccctacctggac
atccccttccagcacgccagcccgaaagtgctgaagcccatgaagcgccccgccttcgag
gacaagaccctggcgcgcatcaagaagtggcgcgagatctgccccgagctgaccatccgc
tccaccttcatcgtcggcttccccggcgagaccgaagaagacttccagtacctgctggac
tggctgaccgaagcccagctcgaccgcgtcggctgcttccagtactccccggtggaaggc
gcgccggccaacgacctgggcctggacgtggtacccgatgacatcaagcaggaccgttgg
gagcgcttcatggcgcaccagcaggcgatctccgccgcgcgcctgcaactgaagatcggc
aaggaaatcgacgtgctgatcgacgaagtggacgacgaaggcgcggtcggccgctcctac
gccgacgccccggaaatcgacggcgccgtctacatcgacagcttcgacgtgaagcccggc
gacaaggtgcgcgtgcgcatcaccgacgccgacgagtacgacctctgggccgaactggtc
tga
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