Pseudomonas sp. ATCC 13867: H681_07905
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Entry
H681_07905 CDS
T02524
Symbol
rumA
Name
(GenBank) 23S rRNA m(5)U1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pdr
Pseudomonas sp. ATCC 13867
Brite
KEGG Orthology (KO) [BR:
pdr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdr03009
]
H681_07905 (rumA)
Enzymes [BR:
pdr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
H681_07905 (rumA)
Ribosome biogenesis [BR:
pdr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
H681_07905 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
PCMT
Methyltransf_11
MTS
Cons_hypoth95
Methyltransf_23
TRM5-TYW2_MTfase
RrnaAD
Methyltransf_15
Methyltr_RsmB-F
Ubie_methyltran
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
AGI23457
UniProt:
M4WXI3
LinkDB
All DBs
Position
1723076..1724428
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AA seq
450 aa
AA seq
DB search
MAKQRTGLRFQPSGGARSPAVPVGKKQRLSIERLAHDGRGIAHADGRTWFVAGALPGEAV
EARVLSARAQIVDARSERIFTAAENRRTAPCPVAGTCGGCSLQHLPHADQLVLKQRTLAE
QLERFSGLSPEEWAAPLVGPEFGYRRRARLAVRWDVKAKRLEVGFRAAASQAIVPFDDCL
VLVPELQILARELPDLLRGLAKPQALGHVELFHGTASALLLRHIEPLSDSDLARLLGFCS
ARDVQLWLQGDGEPTPCSGNADLGFRLDTWDLTLAYRPGDFVQVNAPVNEAMVAQALDWL
KPAPGERVLDLFCGLGNFALPLAHRVREVVGVEGVQAMVDRAAANARANGLANTRFHQAD
LSKPLAGAPWAAEDFTAVLLDPPRDGAFEAAREMRSLGAERVLYVSCNPATLARDAGEMA
RQGYRLKRAGILDMFPQTAHVEAMALFEAS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcagagaaccggcctgcgcttccagcccagcggcggagcgcggagccctgcg
gtaccggtaggcaagaagcagcgtctgagcatcgagcgcctggcccacgacggccgtggc
atcgcccatgccgatggccgcacctggttcgtcgccggcgccttgccgggcgaagcggtg
gaagcccgcgtgctgtcggcgcgcgcgcagattgtcgacgcccgtagcgagcggatcttc
accgccgccgaaaaccgtcgaactgccccgtgtccggtggccggcacctgtggcggctgc
agcctgcagcacctgccccatgccgatcaattggtactcaagcagcgcaccttggccgag
caactggaacgcttctccggcctgagcccggaagagtgggccgcgccgctggtggggccg
gagttcggctatcgccgccgcgcgcgcctcgccgtgcgctgggacgtcaaggccaagcgc
ctggaagtcggcttccgcgccgccgccagccaggccatcgttccgttcgacgactgcctg
gtgctggtgcccgagctgcaaatcctcgcccgcgagttgccggacctgctgcgtggtttg
gccaagccccaggcgctgggccacgtcgaactgttccacggcacggccagcgcgctgctg
ctgcggcatatcgaacctttgtccgatagcgacctggcgcgactgctgggattctgttcg
gcacgcgacgtgcaactgtggttgcagggcgacggagagccgacaccgtgctccgggaac
gccgacctcggcttccggctcgatacctgggatctgaccctggcctaccggcccggcgac
ttcgtccaggtgaatgcgccggtcaacgaggcgatggttgcccaggcgctggattggctg
aagcctgcaccaggcgagcgtgtgctggatctgttctgcggcctgggcaacttcgccctg
ccgctggcgcaccgggtgcgggaagtggtcggggtggagggtgtgcaggcgatggtcgat
cgcgccgccgccaatgcccgggccaatggcctggccaatacccggttccaccaggcggac
ctttcgaaaccgcttgccggcgccccctgggcggcggaggatttcaccgccgtgctgctc
gaccctccgcgagacggagccttcgaggcagcacgggagatgcgttcactgggcgccgag
agggtactgtatgtgtcctgcaatccggcgaccctggcgcgcgacgccggcgagatggcc
cgacagggctatcgcctgaagcgtgccggcatcctcgacatgttcccgcagacggcacat
gtggaggcaatggctttgttcgaggcgagctag
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