Pseudomonas sp. ATCC 13867: H681_12855
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Entry
H681_12855 CDS
T02524
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pdr
Pseudomonas sp. ATCC 13867
Pathway
pdr00300
Lysine biosynthesis
pdr00470
D-Amino acid metabolism
pdr01100
Metabolic pathways
pdr01110
Biosynthesis of secondary metabolites
pdr01120
Microbial metabolism in diverse environments
pdr01230
Biosynthesis of amino acids
Module
pdr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pdr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
H681_12855
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
H681_12855
Enzymes [BR:
pdr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
H681_12855
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AGI24441
UniProt:
M4WYW8
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All DBs
Position
2873187..2874431
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AA seq
414 aa
AA seq
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MSFLALPRAEQLALQFGTPLWVYDAATIRGQIERLKSFDIIRFAQKACSNLHILRLMREQ
GVKVDAVSQGELLRALAAGYSCREDESEIVFTADLLDRATLETVVEHGIPVNAGSIDMLR
QLGDVAPGHPVWLRINPGFGHGHSNKTNTGGEHSKHGIWHSDLHAALDVIRERGLRLVGL
HMHIGSGVDYGHLAQVGEAMLGLVRLVRDAGHDLSGISAGGGLSIPYRDGDPEVDTAHYF
QLWDTARKAAEDVVGHPLHLEIEPGRYLVAQAGCLLSEVRATKDAGRNHFVLVDAGFNEL
MRPSMYGSYHGISVLAGDVASREVIDTVVAGPLCESGDVFTQGDGGVVIPRALPRAQVGD
LLLIHDTGAYGASMSSNYNSRPLIAEVLLDGADTRLIRRRQRVEELLALEEQLD
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcctcgccctgccccgcgccgaacagctcgccctgcaattcggcaccccgctg
tgggtctacgacgccgccaccatccgcggccagatcgagcgcctgaagagcttcgacatc
atccgcttcgcccagaaggcctgctcgaacctgcacatcctgcgcctgatgcgcgaacag
ggggtgaaggtcgacgccgtgtcccagggcgaactgctgcgcgccctggccgctggttat
tcgtgccgcgaggatgaatccgagatcgtcttcaccgccgacctgctggaccgcgccacc
ctggagaccgtggtcgagcacggcatcccggtgaacgccggctccatcgacatgctccgc
cagttgggcgacgtcgcccccggccacccggtatggctgcgcatcaacccaggtttcggc
cacggccacagcaacaagaccaacaccggcggcgagcactccaagcacggcatctggcac
agtgacctgcacgcagccctggatgtgatccgcgaacgcggcctgcgcctggtcggcctg
cacatgcacatcggctcgggcgtcgactacggccacctggcccaggtcggcgaggccatg
ctcggcctggtgcgcctggtgagggacgccggtcacgacctgtccgggatctccgccggc
ggcggcctgtccatcccctaccgcgacggcgatccggaagtggacaccgcgcactacttc
cagctctgggacaccgcccgcaaggccgccgaggacgtggtcggccacccactgcacctg
gagatcgagccgggccgctacctggtcgcccaggccggctgcctgctcagtgaagtacgt
gccaccaaggatgccggtcgcaaccacttcgtgctggtggatgccggcttcaacgagctg
atgcgcccgtccatgtacggcagctaccacggcatcagcgtgctggccggcgacgtggcc
agccgcgaggtgatcgacaccgtggtggccggcccgctgtgcgagtccggcgacgtgttc
acccagggcgatggtggcgtggtcatcccccgcgccctgccgcgcgcccaggtcggcgac
ctgctgttgatccatgacaccggcgcctatggcgcgtccatgtcgtcgaactacaacagc
cgcccattgattgccgaagtgctgctcgacggcgccgacactcgactgatccgccgtcgc
caacgcgtggaagagttgctggcgctggaagaacaactggactga
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