Pseudomonas sp. ATCC 13867: H681_15760
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Entry
H681_15760 CDS
T02524
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pdr
Pseudomonas sp. ATCC 13867
Brite
KEGG Orthology (KO) [BR:
pdr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdr03016
]
H681_15760
Enzymes [BR:
pdr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
H681_15760
Transfer RNA biogenesis [BR:
pdr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
H681_15760
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AGI25020
UniProt:
M4XI92
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All DBs
Position
3563026..3563544
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AA seq
172 aa
AA seq
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MSTPPLRLFFALPCPPELAEAICTWRTGLHLDGQGVAQANLHLTLAFLGAIPRGRKADLL
AIGASLPRRAFTLQLDRLARWRNGILHLAPSTVPDELHELAQALREALQANAFEVEQRPF
HPHLTLARHVHTLPPAQPSFEWPARAITLYSSENSPTGVRYRPLGEWPLDHP
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgagcacacccccgctgcggctgttcttcgccctgccctgtccaccggagctggcggaa
gcgatctgcacctggcgcaccggcctgcacctggatggccagggcgtcgcgcaggccaat
ctgcacctgaccctggccttcctcggcgccatcccccgcggccgcaaggcggacctgctg
gccatcggcgcgagcctgccgcgccgcgcgttcaccctgcaactggaccgcctggcccgc
tggcggaacggcatcctgcacctggcgccaagcacggtgcccgacgaactccacgagctg
gcgcaggccctgcgcgaagcgctgcaggccaatgccttcgaggtcgagcagcggccgttc
catccacacctgaccctggcgcgccacgtccacaccctgccgcccgcgcaaccgtccttc
gaatggccggcccgcgcgatcaccctgtacagctcggaaaacagcccgacgggcgtgcgc
tatcgccctctcggcgaatggccgctagaccacccctga
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