Pseudomonas sp. ATCC 13867: H681_16260
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Entry
H681_16260 CDS
T02524
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pdr
Pseudomonas sp. ATCC 13867
Pathway
pdr00071
Fatty acid degradation
pdr00280
Valine, leucine and isoleucine degradation
pdr00310
Lysine degradation
pdr00362
Benzoate degradation
pdr00380
Tryptophan metabolism
pdr00410
beta-Alanine metabolism
pdr00640
Propanoate metabolism
pdr00650
Butanoate metabolism
pdr00907
Pinene, camphor and geraniol degradation
pdr00930
Caprolactam degradation
pdr01100
Metabolic pathways
pdr01110
Biosynthesis of secondary metabolites
pdr01120
Microbial metabolism in diverse environments
pdr01200
Carbon metabolism
pdr01212
Fatty acid metabolism
Module
pdr_M00087
beta-Oxidation
pdr_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pdr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
H681_16260 (fadB)
00650 Butanoate metabolism
H681_16260 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
H681_16260 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
H681_16260 (fadB)
00310 Lysine degradation
H681_16260 (fadB)
00380 Tryptophan metabolism
H681_16260 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
H681_16260 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
H681_16260 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
H681_16260 (fadB)
00930 Caprolactam degradation
H681_16260 (fadB)
Enzymes [BR:
pdr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
H681_16260 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
H681_16260 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
H681_16260 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
H681_16260 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AGI25120
UniProt:
M4XII5
LinkDB
All DBs
Position
complement(3668074..3670221)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYQGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRQAVDTIKADASVKGVIVTS
GKGVFIVGADITEFVDNFKLSDEELLAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMSATAKIGLPEVKLGIYPGFGGTVRLPRVIGCDNAVEWIASGKENRAEDAL
KVGAVDAVVAPEQLQAAALDLVKRAIAGELDHKARRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKSIQKAANFGRDKALEIEAQGFVKLAKTSVAQSLIGLFLNDQDL
KKKAKQYDEIAKDVKLAAVLGAGIMGGGIAYQSASKGTPILMKDIREEGIQMGLNEASKL
LGKRVEKGRMTPAKMAEALNAIRPTMSYGDFGNVDIVVEAVVENPKVKQIVLAEVEGVVK
EDAVLASNTSTISINLLAKALKRPQNFVGMHFFNPVHMMPLVEVIRGEKSSDVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFSKLLGFGVDFVRIDKIMEKFGWPMGPAYL
SDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYDANRLGQKNGKGFYAYETDKRGKP
KKVTDPQAYELLKSIVTEQRELTDEDIINYMMIPLCLETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQKFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaaggtaaagccatcacggttaaggctcttgagagcggcatcgtcgaactg
aatttcgacctcaagggcgagtccgtcaacaagttcaaccgactcaccctgaatgaactg
cgccaagcagtcgataccatcaaggccgatgcgtccgtcaagggcgtgatcgtgaccagc
ggcaagggcgtgttcatcgtcggcgccgatatcaccgagttcgtcgacaacttcaagctg
tccgacgaagagctgctggccggcaacctcgaagccaacaagatcttcagcgacttcgaa
gacctgaacgttcccaccgtggccgcgatcaacggcatcgccctgggcggcggtctggaa
atgtgcctggctgccgacttccgtgtcatgagcgccaccgccaagatcggcctgccggaa
gtgaagctgggcatctacccgggcttcggcggcaccgtgcgcctgccgcgcgtcatcggt
tgcgacaacgccgtcgagtggatcgcctcgggcaaggaaaaccgcgctgaagacgcgctg
aaagtcggcgccgtcgatgccgtcgtggcgccggagcaactgcaagccgccgccctggac
ctggtcaagcgcgccatcgccggcgagctggatcacaaggcccgccgtcagccgaagctg
gaaaagctcaagctgaatgccatcgagcagatgatggccttcgaaaccgccaagggcttc
gtcgcaggccaggccggcccgaactacccggctccggtcgaagcgatcaagtcgatccag
aaagccgccaacttcggtcgtgacaaggcgctggaaatcgaagcccagggcttcgtcaag
ctggccaagacctcggttgcgcagagcctgatcggcctgttcctgaacgaccaggacctg
aagaagaaggccaagcagtacgacgagatcgccaaggacgtgaaactggccgccgtactg
ggcgccggcatcatgggtggcggcatcgcctaccagtccgcttccaagggcactccgatc
ctgatgaaggatatccgcgaagagggtatccagatgggtctgaacgaagcctcgaagctg
ctgggcaagcgcgtcgaaaaaggccgcatgaccccggccaagatggccgaggccctgaac
gccattcgcccgaccatgtcctacggcgacttcggcaacgtcgacatcgtcgtcgaagcc
gtggtcgagaatccgaaggtcaagcagatcgtactggccgaagttgaaggcgtggtgaag
gaagatgcggtcctcgcgtcgaacacctccaccatctccatcaacctgctggccaaggcg
ctcaagcgtccgcagaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtcgaagtgatccgtggcgagaagtccagcgacgtcgccgtcgccaccaccgtggcc
tacgccaagaagatgggcaagaaccccatcgtggtgaatgactgccccggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggcttctccaagctgctgggcttcggcgtggac
ttcgtgcgcatcgacaagatcatggagaagttcggctggcccatgggcccggcctacctg
tccgacgtggtcggcatcgacaccggccaccacggccgcgacgtgatggctgaaggcttc
ccggaccgcatggccgtagaaggcaagaccgccgtcgacgtgatgtacgacgccaaccgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaagcgcggcaagccg
aagaaagtcaccgatccgcaggcttatgagctgctgaagtccatcgtcaccgagcagcgc
gagctgaccgacgaggacatcatcaactacatgatgatcccgctgtgcctggaaaccgtg
cgctgcctggaagacggcatcgtcgagaccgctgccgaggccgacatgggcctgatctac
ggcatcggcttccctcccttccgtggcggtgccctgcgttacatcgactccatcggtgtg
gccgaattcgtcgccctggccgaccagtacgccgacctgggtgcgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagaacggccagaagttcttcggttga
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