Pseudomonas sp. ATCC 13867: H681_17125
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Entry
H681_17125 CDS
T02524
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pdr
Pseudomonas sp. ATCC 13867
Brite
KEGG Orthology (KO) [BR:
pdr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdr03032
]
H681_17125
03400 DNA repair and recombination proteins [BR:
pdr03400
]
H681_17125
Enzymes [BR:
pdr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
H681_17125
DNA replication proteins [BR:
pdr03032
]
Prokaryotic type
DNA Topoisomerases
H681_17125
DNA repair and recombination proteins [BR:
pdr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H681_17125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AGI25293
UniProt:
M4WYP3
LinkDB
All DBs
Position
complement(3866805..3869585)
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AA seq
926 aa
AA seq
DB search
MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEVRMSKLAHELLADLDKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLTEVIDGCLALMDNPELSIDDLMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRV
YIRARATIEDMEKGGNRQQIIITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD
GMRVVIELRRGEVGEVVLNNLYAQTQLQSVFGINVVALVDGQPRTMNLKDMLEVFIRHRR
EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKTSPTPAEAKERLIATGWESSA
VEAMVERAGADACRPEDLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLSEYQ
EILTLIGELIRILTSPERLMEVIREELEKVKAEFGDARRTEIVASQMDLTIADLITEEER
VVTISHGGYAKSQPLAAYEAQRRGGKGKSASGVKDEDYIEHLLVANSHATLLLFSSKGKV
YWLRTFEIPEASRTARGRPLVNLLPLDEGERITAMLQIDLEAVRAQFAGDDNDDDDVVAE
QVAEVVEAEEAEEGDDADFSQDEPTGAYIFMATMKGTVKKTPLIQFTKPRSNGLIALKLE
EGDSLIAAAITDGSKDVMMFSDAGKVIRFKESKVRIMGRNARGVRGMRLGEGQRIISMLI
PECREAQILSASERGYGKRTPLADYPRRGRGGQGVIAMVINERNGNLVGAVQVLDGEEIM
LISDQGTLVRTRVDEVRGAGRNTQGVILIKLAADETVVGLERVQEPTVVEDEDDVIDGEI
VEGEVSEENPEAGEAVAEEAPQASED
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaacatcgaagacgaactccgacagtcc
tacctcgattacgccatgagcgtgatcgtcggtcgtgccctgcccgatgcgcgcgacggc
ttgaagcccgtgcatcgccgcgtcctgtacgccatgagcgaactgggcaacgactggaac
aagccctacaagaagtctgcccgtgtggtcggcgacgtgatcggtaagtaccacccgcac
ggcgacaccgcggtgtacgacaccatcgtccgcatggcccagccgttctcgctgcgctac
atgctggtcgacggccagggcaacttcggttcggtggacggcgacaacgccgcggccatg
cgatacaccgaagtgcgcatgtccaagcttgcccatgagctgctggcggacctggacaag
gaaaccgtcgactgggtgcccaactacgatggcaccgagcagatcccggcggtcatgccg
accaagatcccgaacctgctggtcaacggttccagcggtatcgccgtgggcatggcgacc
aacatcccgccgcacaacctcaccgaggtgatcgacggctgcctggcgctgatggacaac
cccgagctgtccatcgatgacctgatgcagtacatccccggtccggacttcccgaccgcg
ggcatcatcaacggccgtgcgggcatcatcgaggcctatcgcaccggtcgtggccgcgtc
tatatccgtgcccgcgccaccatcgaggacatggagaagggtggcaaccgccagcagatc
atcatcaccgagctgccctaccagttgaacaaggcccgcctgatcgagaagatcgccgag
ctggtgaaagagaagaagatcgaaggcatcaccgagctgcgcgacgagtccgacaaggac
ggcatgcgcgtggtcatcgagctgcgccgcggcgaagtgggcgaggtcgtgctgaacaac
ctctacgcgcagacccagctgcagagcgtcttcggcatcaacgtggtggccctggtcgac
ggccagccgcgcacgatgaacctcaaggacatgctcgaggtgttcatccgtcaccgccgt
gaagtggtgacccgccggaccgtctacgagctgcgcaaggcgcgcgaacgtggccacatc
ctcgaaggtcaggccgttgccctgtcgaacatcgacccggtgatcgaactgatcaagacc
tcgccgaccccggccgaggccaaggaacgcctgatcgccactggctgggaatccagcgcc
gtggaagcgatggtcgagcgcgccggcgccgatgcctgccgtccggaagacctggacccg
cagtacggcctgcgtgacggcaagtacttcctgtcgccggagcaggcccaggccatcctg
gaattgcgcctgcaccgcctgaccggcctggagcacgagaagctcctgtccgagtaccag
gaaatcctcaccctgatcggcgagctgatccgcatcctgaccagtcccgagcgcctgatg
gaagtcatccgcgaagagctggagaaggtcaaggccgagttcggcgacgcccgccgcacc
gagatcgtcgcgtcgcagatggacctgaccatcgccgacctgatcaccgaagaagagcgc
gtggtgaccatctcccacggcggttacgccaagtcccagccgctggccgcctacgaggcc
cagcgtcgcggtggcaagggcaagtccgccagtggcgtgaaggacgaggactacatcgaa
cacctgctggtcgccaacagccacgccaccctgctgctgttctccagcaagggcaaggtc
tactggctgcgcaccttcgagatcccggaagcctcgcgtaccgcccgtggccgtccgctg
gtgaacctgctgccgctggacgaaggcgagcgcatcaccgcgatgctgcagatcgacctg
gaagccgtgcgcgcccagttcgccggcgacgacaacgatgacgacgacgtggttgccgag
caggtcgccgaagtggtggaagccgaagaggccgaagagggcgacgacgccgacttcagc
caggacgagccgaccggcgcgtacatcttcatggccaccatgaaaggtaccgtgaagaag
accccgctgatccagttcaccaagccgcgttccaacggcctgatcgccctgaagctggaa
gagggcgactcgctgatcgccgccgccatcaccgacggttcgaaggacgtgatgatgttc
tccgacgccggtaaggtgatccgcttcaaggaaagcaaggtgcgcatcatgggccgtaac
gcccgtggcgtgcgcggcatgcgcctgggcgaaggccagcgcatcatctcgatgctgatc
cccgagtgccgcgaggcgcagatcctcagcgcctccgaacgcggctacggcaagcgcacc
ccgctggccgactacccgcgtcgcggtcgtggtggccagggcgtgatcgccatggtgatc
aacgagcgtaacggcaacctggtcggcgccgtgcaggtgctggacggcgaggaaatcatg
ctgatttccgaccagggcaccctggtgcgtacccgcgtcgacgaagttcgcggtgcgggc
cgtaacacccagggcgtgatcctcatcaagctcgccgccgacgagaccgtcgtgggcctg
gagcgggtgcaggagccgaccgtggtggaagacgaagacgacgtcatcgacggcgagatc
gtcgagggcgaagtgtcggaagagaacccagaagcaggcgaagctgtggctgaagaagcc
ccgcaggccagcgaagactga
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