Pseudomonas sp. ATCC 13867: H681_21050
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Entry
H681_21050 CDS
T02524
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pdr
Pseudomonas sp. ATCC 13867
Brite
KEGG Orthology (KO) [BR:
pdr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdr03016
]
H681_21050 (truB)
Enzymes [BR:
pdr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
H681_21050 (truB)
Transfer RNA biogenesis [BR:
pdr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
H681_21050 (truB)
Prokaryotic type
H681_21050 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AGI26077
LinkDB
All DBs
Position
complement(4714047..4714961)
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AA seq
304 aa
AA seq
DB search
MAQVKRIRRAVNGVLVLDKPRGMSSNQALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDADKAYETVAQLGVTTTTGDAEGEVVEQREITVGREAIEAVLPRFRGDIE
QVPPMYSALKKDGQPLYKLARAGEVVEREARSVTIARLDLLAFESPCATLAVSCSKGTYV
RTLVEDIGRELGCGAHVAALRRTQAGPFQLNQSVTLEELEKVHAEGGNEALDRFLLPVDA
GLEHWPLLQLSEHSAYYWLHGQPVRAPEMPKFGMLRVQDHEGRFIGIGEVTEDGRLAPRR
LIRS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtgaaacgaatccgccgtgcggtcaacggcgtgttggtgctcgacaagccg
cgcggcatgagctccaaccaggccctgcagaaggtgcgctggctgctcaacgccgagaag
gccggtcataccgggagcctcgatccactggccaccggcgtgctgccgctgtgcttcggc
gaggcgaccaagttctcccagtatctgctggatgccgacaaggcctatgagactgttgcc
cagctgggcgtcaccaccaccaccggcgatgccgagggtgaggtggtcgagcagcgtgaa
ataaccgtcggtcgggaagccatcgaagccgtgctgccgcgcttccgcggcgacatagag
caggtgccgccgatgtattcggcactgaagaaggatggccagccgctgtacaagctggcg
cgtgcaggagaggtagtggagcgcgaggcgcgttctgttactattgcgcgcttggatttg
ctcgccttcgagtcgccttgtgcgactctggccgtttcctgcagcaagggcacctacgtt
cgcaccctggtcgaagacatcggccgcgagcttgggtgtggcgctcacgtcgccgccctg
cgccggacccaggccgggccgttccagctgaaccagtcggtgacgctggaggaactcgag
aaagtccatgccgagggtggcaacgaagccctcgaccgcttcctgctgccggtggacgcc
ggcctggagcactggccgctgctgcagctttccgagcacagcgcctactactggctgcac
gggcagccggtgcgcgctcccgagatgccgaagttcggcatgctgcgggtgcaggatcac
gaaggtcgtttcatcggtatcggtgaagtgaccgaagacgggcgcctggcgccgcgtcga
ctgattcggtcgtaa
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