Pseudomonas sp. ATCC 13867: H681_22180
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Entry
H681_22180 CDS
T02524
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pdr
Pseudomonas sp. ATCC 13867
Pathway
pdr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
H681_22180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdr03019
]
H681_22180
03009 Ribosome biogenesis [BR:
pdr03009
]
H681_22180
Messenger RNA biogenesis [BR:
pdr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H681_22180
Ribosome biogenesis [BR:
pdr03009
]
Eukaryotic type
Pre-60S particles
RNases
H681_22180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AGI26303
LinkDB
All DBs
Position
complement(4956484..4957026)
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AA seq
180 aa
AA seq
DB search
MQNPQNLIWIDLEMTGLDPDKDVIIEMATIVTDSDLNILEEGPVIAVHQSEELLAGMDEW
NTRQHGQSGLTQRVRESTISAAEAEAMTIAFLEKWVPKRSSPICGNSICQDRRFLYRHMP
KLEGYFHYRNLDVSTLKELVARWAPQLRDGFKKGNTHLALDDIRESIAELRYYREHFIKV
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacccacagaacctgatctggatcgacctggaaatgaccggtctggacccggac
aaggacgtcatcatcgagatggcgaccatcgtcaccgacagcgacctcaatatcctcgag
gaaggcccggtgatcgcggtgcaccagagcgaagaactgctcgccggcatggacgagtgg
aacacccgccagcacggccagtccggcctgacccagcgggtgcgcgaaagcaccatttcc
gccgccgaggccgaagccatgaccatcgccttcctggaaaagtgggtgcccaagcgcagc
tcgccgatctgcggcaacagcatctgccaggaccgccgcttcctctatcggcacatgccg
aagctggaaggctacttccactaccgcaacctggatgtctccaccctcaaggaactggtc
gcgcgctgggccccgcagttgcgtgacggcttcaagaaaggcaacacccacctggccctg
gacgacatccgcgagtccatcgccgagctgcgctactaccgtgagcatttcatcaaggtg
taa
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