Pseudomonas sp. ATCC 13867: H681_23275
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Entry
H681_23275 CDS
T02524
Name
(GenBank) nucleotide sugar epimerase/dehydratase WbpM
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
pdr
Pseudomonas sp. ATCC 13867
Pathway
pdr00541
O-Antigen nucleotide sugar biosynthesis
pdr00552
Teichoic acid biosynthesis
pdr01100
Metabolic pathways
pdr01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pdr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
H681_23275
00552 Teichoic acid biosynthesis
H681_23275
Enzymes [BR:
pdr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
H681_23275
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Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
CoA_binding_3
adh_short
3Beta_HSD
KR
ThiF
NAD_binding_4
Methyltransf_14
Motif
Other DBs
NCBI-ProteinID:
AGI26522
UniProt:
M4X626
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Position
5212678..5214636
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AA seq
652 aa
AA seq
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MPRRHKRILQVTVDIFLVWIALWLAFVVRLGEFNAVRPFNGHGWLFISAPLIALPLFIRF
GMYRAVMRYLGNDALVAIVKAVSLSALLLSLAIYWYRGSPVVVPRSMVFNYWWLSLVLLG
GLRLAMRQFFMGSWFDPRTRTDVARGDGRIRVAIYGAGAAGNQLVAALRMGRTLLPVAFI
DDDSSIAGRVISGLQVYKPKHIAQLIDETAASEVLLAIPSASRGRRREMLGMLEAYPLHV
RSVPGVTDLASGKVKVDDLQEVDIADLLGRDAVPPQQALFERCIKQQSVLVTGAGGSIGS
ELCRQILSSGARVLILFEHSEFNLYSIHSELERRIVRESLKIQLVPILGSIRNPVRLHDV
LRTWQVNTVYHAAAYKHVPMVEHNIAEGVLNNLLGTLYTAQSAIKAGVANFVLISTDKAV
RPTNVMGSTKRLAEMVLQALSREAAPALYGDDSVHQVNKTRFTMVRFGNVLGSSGSVIPL
FREQIKRGGPLTVTHPNITRYFMTIPEAAQLVIQAGSMGQGGDVFVLDMGCSVKIVDLAE
KMIRLSGLSVRSESNPHGDICIEFSGLRPGEKLYEELLIGDNVQPTEHPMIMRADEEYLS
WDVLKERLGALLKAVDSDDFVQVRQLLRETVSGYVPDGDIVDHIYIQRRTDV
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtcgccacaagcgcatcctccaggtcactgtcgatatcttcctggtctggatc
gccctgtggctggctttcgtcgttcgactgggcgaattcaatgccgttcgccccttcaac
ggccacggatggttgttcatcagtgcgccgctgatcgccttgccgctcttcatccgcttc
ggcatgtaccgggcggtgatgcgctacctgggtaacgatgcgttggtcgccattgtcaaa
gctgtttcgctttcggcgctgctgctgtccctggcgatctattggtaccgtggaagtccg
gtggtcgtaccgcgctcgatggtgttcaactactggtggctgagcctcgtgctgctcggc
ggcttacgcctggcgatgcgccagttcttcatggggagctggttcgacccacggacaaga
accgatgtcgctcgcggtgacggacgcatacgcgtggccatttatggcgccggcgctgcg
ggcaaccagttggtggcggccttgcgcatgggccgcaccctgttgccggtagcattcatc
gatgacgattcgtccattgccgggcgggtcatttccgggttgcaggtatacaagcccaag
catatcgcgcagttgatcgatgagaccgcggcgagcgaggtgttgctggccattccgtcg
gcgtcccgtgggcgtcgccgcgaaatgctgggaatgctcgaagcctatccgctgcatgtc
cgctcggtaccgggggtcacggaccttgccagcggcaaggtcaaggtcgacgacctgcag
gaagtcgatattgccgacctgctcggacgcgatgccgtgccgccgcaacaggcgttgttc
gagcgctgcatcaagcagcagtcggtactggtgacaggagccggtggctctatcggttcg
gagttgtgcaggcagattctttcttccggtgctcgggtgctgattctgttcgagcattcc
gagttcaatctctacagcattcacagcgaactggagcgccgcatcgttcgtgaatcgctg
aagatccagttagtgccgatactcggctcgatccgcaatccggtgcgactgcacgatgta
ctgcggacctggcaggtgaataccgtttatcacgcggcggcctacaagcatgtgccgatg
gtggagcacaacatcgccgagggtgtgctgaacaacttgctgggcaccctgtataccgcg
cagtcggcgatcaaggctggtgtggcgaatttcgtgctgatctcgaccgacaaggcggtg
cggccgaccaacgtcatgggcagcaccaagcggctggcggaaatggtgctgcaggcgctg
agccgggaagctgcaccggccttgtacggagacgatagtgttcaccaggtgaacaagacc
cgcttcaccatggtgcgtttcggcaatgtactggggtcttccggctcggtgattccgctg
ttccgcgaacagatcaagcgcggtggcccgctcacggtcactcacccgaatatcacacgt
tacttcatgaccattccggaggctgcgcaactggtcattcaggcagggtccatgggacag
ggcggcgacgtgttcgtgctcgacatgggttgctccgtgaagatcgtcgacctggcagag
aagatgatcaggttgtcggggcttagcgtgcgctccgagtccaacccccacggggatatc
tgcatcgagttttccgggttgcgcccgggagagaaactctacgaagagcttctgattggc
gacaacgtacagccgaccgagcatcccatgatcatgcgtgccgatgaggaatatctttcc
tgggatgtgctcaaggagcgcctgggagcattgctcaaggctgtcgattcggacgatttc
gtgcaggttcggcaactgctacgtgaaaccgtcagcggttatgtgccggatggggacatc
gtcgatcacatctatatccaacgtcgcacggacgtgtga
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