Pseudomonas sp. ATCC 13867: H681_23550
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Entry
H681_23550 CDS
T02524
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pdr
Pseudomonas sp. ATCC 13867
Pathway
pdr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H681_23550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdr03019
]
H681_23550
Enzymes [BR:
pdr01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.-
H681_23550
Messenger RNA biogenesis [BR:
pdr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
H681_23550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_2
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
AGI26577
UniProt:
M4X683
LinkDB
All DBs
Position
complement(5282072..5282551)
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AA seq
159 aa
AA seq
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MIDPDGFRPNVGIILCNDVGQVLWARRINQEAWQFPQGGINARETPEEALFRELNEEVGL
EEQDVRILACTRGWLRYRLPQRLVRTNSQPLCIGQKQKWFLLRLTGEESRVRMDVTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLARD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatcccgatggttttcgccccaatgtcggcatcatcctttgcaacgatgtcgga
caggtactgtgggcacggcgaatcaaccaggaagcctggcaatttccccagggtggcatc
aacgcccgcgaaacccctgaggaagcgctgttccgcgaattgaacgaagaagtcggcctg
gaggaacaggacgtacggattcttgcctgtacccgtggctggctgcgttaccgcctgccg
caacgcctggttcggaccaacagccaaccgctgtgcatcgggcagaagcagaaatggttc
ctcctgcgcctgaccggcgaggaaagccgggtgcgcatggatgtgaccggcaaaccggag
ttcgacggctggcgctgggtcagctactggtacccgctcggccaggtcgtgaccttcaaa
cgcgaggtctaccgccgggccctgaaggaattggcaccgcgcctcctggcgcgcgactag
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