Pseudomonas sp. ATCC 13867: H681_24815
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Entry
H681_24815 CDS
T02524
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdr
Pseudomonas sp. ATCC 13867
Pathway
pdr03420
Nucleotide excision repair
pdr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H681_24815 (uvrD)
03430 Mismatch repair
H681_24815 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdr03400
]
H681_24815 (uvrD)
Enzymes [BR:
pdr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H681_24815 (uvrD)
DNA repair and recombination proteins [BR:
pdr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H681_24815 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
H681_24815 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
AGI26830
UniProt:
M4XNM8
LinkDB
All DBs
Position
5569832..5572012
Genome browser
AA seq
726 aa
AA seq
DB search
MNDDLSLLLNSLNDPQRQAVAAPLGRQRVLAGAGSGKTRVLVHRIAWLIQVERASPHSIL
AVTFTNKAAAEMRARIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEAGLPENFQILDSDD
QLRIVKRVVRELGLDEQRWPPRQAQWFINGQKDEGNRPQNIQAGGDLYLSTMVSIYQAYE
EACARAGVVDFAELLLRSLDLWRNRPSLLEHYQRRFRHILVDEFQDTNAVQYAWLRFLAK
GGESLMAVGDDDQSIYGWRGAKIENILSFANDFHDAQDIRLEQNYRSTATILKAANALIA
NNSGRLGKELWTDGVDGDPITLYAGFNEHDEARYIVETIEDALRKDGLKRSEIAILYRSN
AQSRVLEEALLREKIPYRIYGGQRFFERAEIKNALAYLRLIRLRDDDAALERVINVPPRG
IGEKTVEAIRNAARLNGTSMWRAINDVIAAKAVAGRAASALNGFLETVDLLAVKVEGMPL
HQMTQVVIEQSGLITYHKEEKGEKGQARVENLEELVSAARAFETPDDEDTPPLVAFLDHT
ALESGDTQADAFEDSVQLMTLHSAKGLEFPLVFLAGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQRLVMTYAETRRLYGSETYNKVSRFVREIPPGLIQEVRLSNSVSRPLSGNQ
YSGNLFAGAGVPDTPFSLGQSVRHPLFGDGVILNFEGSGAQARVQVNFDSEGSKWLMMGY
AKLEAI
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatgacctctccctcctgctcaattccctcaatgacccgcagcgccaggccgtg
gccgcgccgctggggcgccagcgcgtgctcgccggcgccgggtccggcaagacccgcgtg
ctggtgcaccgcatcgcctggctgatccaggtggagcgcgcctcgccgcacagcatcctg
gcggtgaccttcaccaacaaggccgccgccgagatgcgcgcgcggatcgagcagttgctg
gggatcaacccggccggcatgtgggtcggcaccttccacggcctggcgcaccgcctgctg
cgcgcgcactggcaggaagccgggttgccggagaacttccagatcctcgacagcgacgac
cagctgcgcatcgtcaagcgcgtggtccgcgagctgggcctggacgagcagcgctggccg
ccgcgccaggctcaatggttcatcaacggccagaaggacgagggcaaccgcccgcagaac
atccaggccggcggcgacttgtacctgtcgaccatggtcagcatctaccaggcctacgaa
gaagcctgcgcccgtgccggcgtggtggacttcgccgagctgctgctgcgctcgctggac
ctctggcgcaaccgtccgagcctgctggagcactaccagcggcgcttccgccacatcctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggctgcgcttcctcgccaag
ggcggcgaaagcctgatggcggtgggcgacgacgatcagtcgatctacggctggcgcggc
gcgaagatcgagaacatcctgagcttcgccaacgacttccacgatgcccaggacatccgc
ctggagcagaactaccgctccaccgcgaccatcctgaaggccgccaacgcgctgatcgcc
aacaacagcgggcgcctgggcaaggagctgtggaccgacggcgtcgacggcgacccgatc
accctctacgccggcttcaacgagcacgacgaggctcgctacatcgtcgaaacgatcgaa
gacgccctgcgcaaggacggtctcaagcgcagcgaaatcgccattctctaccgctccaac
gcccagtcccgcgtgctggaagaggcgctgctgcgggagaagatcccctaccgcatctac
ggcggccagcgcttcttcgagcgcgccgagatcaagaacgccctggcctacctgcgcctg
atccgcctgcgcgacgacgacgccgcgctggaacgggtgatcaacgtgccgccgcgcggc
atcggcgagaagaccgtcgaggcgatccgcaacgccgcgcgcctgaacggcacctcgatg
tggcgcgcgatcaacgacgtgatcgccgccaaggccgtggccggccgcgccgccagcgcg
ctgaacggcttcctggagaccgtcgacctgctcgcggtgaaggtcgaaggcatgccgctg
caccagatgacccaggtcgtcatcgagcagtccggactgatcacctaccacaaggaagag
aagggcgagaaaggccaggcccgggtggaaaacctggaggaactggtcagcgccgcccgc
gccttcgagaccccggacgacgaggacacgccgccgctggtggccttcctcgaccacacc
gcgctggagtccggcgacacccaggccgatgccttcgaggacagcgtccagctgatgacg
ctgcacagcgccaagggcctggagttccccctggtattcctcgccggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagaacccggccgcctcgaggaagaacgccgcctg
gcctacgtcggcatcacccgcgccatgcagcgcctggtcatgacctacgcggaaacccgc
cgcctgtatggcagcgagacctacaacaaggtgtcgcgcttcgtccgcgagatcccgccg
ggcctgatccaggaagtacgcctgtccaactcggtgagccgtccgctgtcgggcaaccag
tacagcggcaacctgttcgccggcgccggtgtgcccgacaccccgttcagcctcggccag
tccgtgcgccacccgctgttcggcgacggcgtgatcctcaacttcgaaggctccggcgcc
caggcccgggtgcaggtgaacttcgacagcgagggcagcaagtggctgatgatgggctac
gcgaagctggaagcgatctga
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