Photobacterium damselae subsp. damselae: CAY62_00550
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Entry
CAY62_00550 CDS
T04927
Name
(GenBank) integrase
Organism
pds
Photobacterium damselae subsp. damselae
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Gene cluster
GFIT
Motif
Pfam:
rve
HTH_7
HTH_38
HTH_23
Sigma70_r4_2
NUMOD1
Sigma70_r4
rve_3
HTH_50
GerE
HTH_29
HTH_11
HTH_58
TnsD
HTH_40
HTH_30
HTH_22
HTH_28
YdaS_toxin
HTH_36
HTH_17
HTH_24
DUF2089
Sigma70_ECF
HTH_10
HTH_Tnp_ISL3
Terminase_5
GntR
ANT
UDG
GcrA
Phage_NinH
HTH_Tnp_Tc3_2
LacI
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
ARR48218
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Position
I:complement(116495..117538)
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AA seq
347 aa
AA seq
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MLTKEIYVDIHVRFKQGQSIRKIARELGVSRNTVKKYLHHNALPMYTGRKSTPSKLDSYK
PYLIERINQAKPDWLPATVLFDEVKQRGYNGGIAQLRRFIRQFRQQIPAEPLIRFETQPG
QQLQIDFTTIRRGKRPLKAFVATLGFSRACFVKFFDNERSSAWQQGLQEAFEYFGGVTKE
VLCDNAKALIIKRDAYAEGEHKLHDEMLQMSKDYGFKLMACKPYRAKTKGKVERFNHYLK
NSFILPLVTQLRVQNLELDSDIANAKVGPWLERIAHQRIHGTTQEKPADRLVQEVEYLQP
LPVMIQQPLAQGATLSMAVVPPSNVINLQHPMSVYESLQFGEHNVTV
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaaggagatatacgtggatatccatgttcgctttaagcaaggtcaaagtatt
cgaaaaattgcccgagagcttggtgtgtcaagaaataccgtaaaaaagtatctacaccat
aatgcattacctatgtatacgggacgtaaatccaccccatcgaaattagactcatataag
ccatatttgattgagcggatcaatcaggctaagcctgattggctacctgctactgtatta
tttgatgaagtaaaacaacgaggttataacggcgggattgcccagttacgtcgttttatt
cgtcaatttcgacagcaaataccagcagagccactcattcgttttgaaacacagccagga
cagcagttacaaattgatttcaccacgattaggcgaggaaaacgaccactcaaagcattt
gttgcgacgttaggattttctcgtgcttgctttgttaaattctttgataacgagcgctct
tctgcatggcagcaaggtctacaagaagcgtttgaatattttggtggcgtaacaaaagag
gtgctctgcgataatgcgaaagcattgataatcaagcgagacgcttatgctgaaggagag
cataagttacacgatgaaatgctacaaatgtcaaaagattatggctttaagctcatggct
tgtaagccctatagagcgaagacaaaaggcaaagttgaacgttttaatcattatttaaag
aacagctttatcttaccgctagtcacgcaacttcgagttcaaaatttagaacttgatagc
gatattgctaatgccaaagtaggcccttggcttgaacgaatagcacatcaacgtattcat
ggaacaacacaagaaaaaccagcagatagattagtgcaggaagttgagtacctacaaccg
ttaccggtaatgatacagcaaccactagcgcaaggagcaacattatcgatggcggtagta
ccgccgagtaatgttattaatcttcagcacccgatgtctgtttatgagtcactacaattt
ggtgagcacaatgttactgtataa
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