Photobacterium damselae subsp. damselae: CAY62_00670
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Entry
CAY62_00670 CDS
T04927
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pds
Photobacterium damselae subsp. damselae
Pathway
pds03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAY62_00670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pds03019
]
CAY62_00670
03110 Chaperones and folding catalysts [BR:
pds03110
]
CAY62_00670
03029 Mitochondrial biogenesis [BR:
pds03029
]
CAY62_00670
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pds04147
]
CAY62_00670
Enzymes [BR:
pds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CAY62_00670
Messenger RNA biogenesis [BR:
pds03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CAY62_00670
Chaperones and folding catalysts [BR:
pds03110
]
Heat shock proteins
HSP60 / Chaperonin
CAY62_00670
Mitochondrial biogenesis [BR:
pds03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CAY62_00670
Exosome [BR:
pds04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CAY62_00670
Exosomal proteins of other body fluids (saliva and urine)
CAY62_00670
Exosomal proteins of breast cancer cells
CAY62_00670
Exosomal proteins of colorectal cancer cells
CAY62_00670
Exosomal proteins of bladder cancer cells
CAY62_00670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
ARR48239
LinkDB
All DBs
Position
I:144671..146314
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFGNDARIKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIISEGLKAVAAGMNPMDLKRGI
DKAVAAAVEELKALSVPCADTKAIAQVGTISANSDATVGNLIAEAMDKVGRDGVITVEEG
QALQDELDVVEGMQFDRGYLSPYFINNQEAGAVELESPFILLVDKKISNIRELLPALEGV
AKASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTAGTV
ISEEVGLELEKVQLEDLGQAKRVTITKENTTIIDGFGEEEMIAGRVAQIRQQIEDATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI
RAASKLTELTGDNEEQNVGIRVALRAMEAPIRQITKNAGDEESVVANNVKGGEGNYGYNA
ATGEYGDMIDMGILDPTKVTRSALQFAASVAGLMITTEAMVTDLPQKDAGVPDMGGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaatttggtaacgatgcacgtatcaaaatgctagaaggtgta
aacgttctagcagacgctgtaaaagtaacattaggccctaaaggtcgtaacgttgtattg
gataaatcatttggtgcaccaactatcactaaagatggtgtatctgttgcgcgtgaaatt
gaattggaagacaaattccaaaacatgggcgcacaaatggttaaagaagtcgcatctcaa
gcaaacgatgctgcaggtgacggtactacaacggctacagtactggctcaagcaattatc
tctgaaggtctaaaagcggttgctgcgggtatgaacccaatggatcttaagcgtggtatc
gacaaagcagtagctgctgctgttgaagagctaaaagcactatctgttccttgtgctgat
actaaagcgattgctcaggtaggtactatctctgcaaactctgatgcaactgtgggtaac
ctaattgcagaagctatggataaagttggtcgtgatggtgttatcacagttgaagaaggc
caagcgctacaagatgagttagatgtagttgaaggtatgcagttcgatcgcggttaccta
tctccatacttcatcaacaaccaagaagcaggtgcggtggagctagaaagcccatttatc
cttcttgttgataagaaaatctctaacatccgtgagctattaccagcactagaaggcgtt
gcaaaagcatctcgtcctctactgatcgtcgctgaagatgttgaaggtgaagcactagcg
acacttgttgtgaacaacatgcgtggcattgttaaagttgctgctgttaaagcacctggt
tttggtgatcgtcgtaaagcaatgctacaagatatcgcggttctaactgcaggtactgtg
atttctgaagaagtaggcctagagcttgagaaggttcaactagaagatcttggtcaagct
aagcgtgtaactattactaaagaaaacactacaatcatcgatggcttcggtgaagaagag
atgattgcaggtcgtgttgctcaaattcgccaacaaatcgaagatgcaacatcagactac
gacaaagaaaaacttcaagagcgtgtcgctaaacttgctggcggtgttgccgttattaaa
gttggtgccgcaactgaagttgaaatgaaagagaagaaagaccgcgttgaagatgctctt
catgcaactcgtgctgcagttgaagaaggtgttgttgccggtggtggtgttgctcttatt
cgtgccgcatctaaactaactgagcttactggcgataacgaagaacaaaacgtaggtatt
cgtgttgctcttcgcgcaatggaagctccaatccgtcaaatcactaagaatgcgggcgac
gaagaatctgttgttgctaacaatgtgaaaggcggcgaaggtaactacggttacaacgcg
gcaacgggtgaatacggcgatatgattgacatgggtatcctagacccaacaaaagtaacg
cgtagcgcacttcagttcgcagcctctgtagccggtcttatgatcacaacagaagctatg
gttacagacctaccacagaaagatgctggtgtacctgatatgggtggcatgggcggaatg
ggtggtatgggcggcatgatgtaa
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