Photobacterium damselae subsp. damselae: CAY62_01960
Help
Entry
CAY62_01960 CDS
T04927
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
pds
Photobacterium damselae subsp. damselae
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pds03000
]
CAY62_01960
Transcription factors [BR:
pds03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CAY62_01960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Cyclase_polyket
Phage_head_fibr
Motif
Other DBs
NCBI-ProteinID:
ARR48453
LinkDB
All DBs
Position
I:440221..441108
Genome browser
AA seq
295 aa
AA seq
DB search
MSHLNYNHLYYFWMVCKQGSVTKAADALFLAPQTVTGQIRALEERLKGKLTKRVGRNIEP
TELGQLVFKYADRMFDLSYEMLDIVNYTQRENQLLEVGVADALSKRLVSKILLVGMPEDE
KIHLRCYESTHEMLLERLSQHKLDMILSDCPVDSTQSPGLYSKKLGESSMSFFCQTPEHP
VDFPACIEDYKLLVPGPRTAMGRKLYQWFEQQGLTPNILGEFDDAALMKAFGAYHRSMFV
APSIYAEELEESNKFCELKRVREIKEEYYVIFAERMIMHPAVKTICETDFGYLFR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatctcaactacaatcatctttattacttctggatggtatgcaaacaaggatca
gtgaccaaagctgcagatgcactattccttgcccctcagacggtaactggccaaatccgc
gccttagaagagcgtttaaaaggcaaactaaccaaacgtgttggacgtaacattgagcca
acggagcttggacagttggtttttaaatacgcagaccgtatgtttgatttaagctatgaa
atgcttgatatcgtcaattacacccaacgagaaaatcagttattagaagttggagtcgcc
gatgcattatctaagcggttggtgagtaaaattctactggttggtatgccagaagatgaa
aaaattcatctacgctgttatgaatccactcatgaaatgcttttagagcgcctctctcag
cacaaactggacatgatcttatcagattgtcctgttgattcgacgcaaagcccaggcctt
tacagtaaaaaactgggagaatctagcatgagctttttttgtcaaacgcctgagcatcca
gttgatttccctgcctgtattgaagactataagttactggttcctggccctcgtactgcg
atgggacgcaaattatatcagtggtttgagcagcaaggcttaacgccaaatattcttggt
gagtttgacgatgccgccttaatgaaagcttttggtgcttaccatcgttctatgtttgtt
gcgccttcgatttatgcagaagagctagaagaatcgaataaattttgtgaattgaaacgt
gtgcgtgagataaaagaagagtactacgtgatttttgccgaacgtatgattatgcatcca
gcagtaaaaactatctgtgaaaccgattttggttatctattccgctaa
DBGET
integrated database retrieval system
