Photobacterium damselae subsp. damselae: CAY62_03240
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Entry
CAY62_03240 CDS
T04927
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pds
Photobacterium damselae subsp. damselae
Pathway
pds00300
Lysine biosynthesis
pds01100
Metabolic pathways
pds01120
Microbial metabolism in diverse environments
pds01230
Biosynthesis of amino acids
Module
pds_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CAY62_03240
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pds01002
]
CAY62_03240
Enzymes [BR:
pds01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
CAY62_03240
Peptidases and inhibitors [BR:
pds01002
]
Metallo peptidases
Family M20
CAY62_03240
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M18
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ARR48674
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All DBs
Position
I:complement(714856..715989)
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AA seq
377 aa
AA seq
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MSDSPVISLAKDLLSRRSVTPEDAGCQDVMIERLRQLGFCIETMVFDDTTNLWARRGTQA
PLFVFAGHTDVVPSGPIEQWHTHPFEPTIKDGMLYGRGAADMKGSLACMIVAIERFIAEN
PDHQGSIGLLITSDEEGPFINGTTRVVDTLEARNEKIDLCIVGEPSSTLVVGDVVKNGRR
GSITGDLTVKGIQGHVAYPHLADNPVHRALPALAELAAKIWDNGNDYFPPTSFQIPNINA
GTGASNVVPGECQVQFNFRFSTELTDEAIKAQVHEILDQHQLDYQLNWTLSGHPFLTEKG
TLVDAVVAAIEEVAHITPELSTSGGTSDGRFIARTGAQVIELGPVNATIHKVNECVKIED
LELLTDMYQKVLEKTLA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatagtcctgttatttcgctggctaaggatttgctcagccgccgctccgtcact
cctgaagatgctggctgccaagatgtaatgatagagcgtttacgccaacttggtttttgt
attgaaaccatggtatttgacgataccactaacttatgggctcgccgaggcactcaagct
cctctgtttgtttttgctggtcataccgatgtagtcccatcaggcccaatagagcaatgg
catactcatccttttgagcccacgattaaagatggcatgctatatgggcgaggagctgcc
gatatgaaaggttccttagcctgtatgattgtcgctattgaacgttttattgcagaaaac
ccggatcatcaaggatctatcggtcttcttatcacttccgatgaagaagggccatttatt
aacgggacaacacgtgtggttgatacgctcgaagcacgtaatgaaaaaattgatctctgt
attgtgggcgaaccatcttcaacgcttgttgtgggtgatgtggtcaaaaatggacgtcgt
ggatccattacaggcgatctaaccgtaaaagggatccaaggccatgttgcctatcctcac
cttgcagataatcccgttcatcgagctctgcctgcactggctgaattagcggcaaaaata
tgggataacggcaatgactattttccgccgaccagctttcagatccccaatatcaacgca
ggtacaggagcatcaaatgtcgttcctggagagtgtcaggttcaatttaacttccgtttt
agtaccgaattaaccgatgaagcgatcaaagctcaagttcatgagattttagatcaacat
cagctcgactatcaattaaactggacactcagcggtcatccattcttaaccgaaaaagga
acactcgttgatgctgtggtggccgcgattgaagaagtcgctcatatcacccccgagctt
tcaaccagtggtggcacttcagatggtcgatttatcgcacgtacaggagctcaagtgatc
gaactggggccagttaatgcgacaattcataaagttaacgaatgtgtcaaaatagaagac
ctggaactgcttactgatatgtatcaaaaagtgcttgaaaaaacattagcttag
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