Photobacterium damselae subsp. damselae: CAY62_03515
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Entry
CAY62_03515 CDS
T04927
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pds
Photobacterium damselae subsp. damselae
Pathway
pds02020
Two-component system
pds02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CAY62_03515
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CAY62_03515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pds03000
]
CAY62_03515
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pds02035
]
CAY62_03515
Transcription factors [BR:
pds03000
]
Prokaryotic type
Helix-turn-helix
Other families
CAY62_03515
Bacterial motility proteins [BR:
pds02035
]
Flagellar system
Flagellar assembly proteins
Others
CAY62_03515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
Mg_chelatase
CUE
bpMoxR
AAA
AAA_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ARR48725
LinkDB
All DBs
Position
I:765264..766709
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AA seq
481 aa
AA seq
DB search
MQGIAKTLVIDDDLQHRRDLSVILDFVGEQHCVISSDQVDEQIWDNTWGACLLGNFQSHK
ALTRIIDALRVQNHIPIIALPEHRSELAGLPNFVGELAQPFNYSQLMDAFRHCQEFLGKK
AFQVPQLGRKNTLFRSMVGRSAAISQVRHLTEQVSKTDASVLILGESGTGKEVVARNIHY
HSSRGKGPFVPVNCGAIPPDLLESELFGHEKGAFTGAIAARKGRFELAEGGTLFLDEIGD
MPMSMQVKLLRVLQERCFERVGGNQTIQANVRIVAATHRNLEEMIANNKFREDLYYRLNV
FPIEMPALRERIEDIPLLLQELLARMEAERANVVHFTPRAITSLMEHKWPGNVRELANLV
ERLIILYPGEMVDVNHLPMSYRHTDLPEFHPEPHATLEQMEQQALADIFAESNDDATSLS
DLPPEGLNLKEMLADLEIDMIRQALEAQNGVVARAADMLGMRRTTLVEKMRKYGLSKDDI
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtatagcaaagactctcgttattgatgacgatctgcagcaccgccgcgatctc
agtgtgatccttgatttcgttggtgaacagcactgcgtcatatcatctgaccaagttgat
gagcaaatatgggataatacttggggtgcctgtttattaggtaattttcagtcacataaa
gcactgactcgtattattgatgccttacgagtgcagaatcacatcccgatcatcgcactt
cctgaacatcgttccgaacttgctggtttacccaatttcgttggtgagctagcccagcca
tttaattacagccagttgatggatgccttccgtcattgccaagagtttttgggcaaaaaa
gcatttcaagttcctcagcttggtcgtaaaaataccttgttccgtagtatggtgggccga
agtgcggcaatcagccaagttcgtcacttaacagaacaagtatcgaaaacggatgccagt
gtcttaattttaggtgaatcaggtacgggtaaagaagtggttgctcgtaatattcactac
cactcttctcgtggcaaaggtccgtttgttcctgtgaactgtggcgcaattccaccagat
cttttagaaagtgaacttttcggtcatgaaaaaggggcatttactggagctattgcagcc
cgtaaaggtcgttttgaattagccgaaggggggactttgttccttgatgagattggtgat
atgccaatgtcaatgcaagttaaattacttcgagttctgcaagagcgctgttttgaacgt
gttggtggtaaccaaactattcaagcaaacgtacgcattgttgcagcaacgcaccgtaat
ttagaagagatgatcgccaacaacaagttccgtgaagacttatattaccgtctgaacgta
ttcccaattgagatgccagcactacgagagcgaattgaagatattccgctattgttgcaa
gagctgcttgctcgtatggaagctgaaagggcaaatgttgttcactttacacctcgtgct
attacttctttaatggagcataagtggccaggtaatgtgcgcgaattagccaatctggtt
gagcgactcattatcctttacccaggtgaaatggtggatgtgaatcatttaccaatgagc
taccgtcatacggatttacccgagttccatccagaacctcatgcaacattagaacagatg
gagcaacaagctctggctgatatctttgctgaaagtaatgatgatgcgacctctttaagc
gatctacctcctgaaggtttaaacttaaaagagatgttggctgatctggaaattgatatg
atccgtcaagcattagaagctcaaaatggggttgttgcacgtgctgccgatatgctgggt
atgcgtcgtacaactctggttgagaaaatgcgtaaatatggtctaagcaaagacgatatt
cgttaa
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