Photobacterium damselae subsp. damselae: CAY62_03530
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Entry
CAY62_03530 CDS
T04927
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
pds
Photobacterium damselae subsp. damselae
Pathway
pds02020
Two-component system
pds02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CAY62_03530
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CAY62_03530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pds02022
]
CAY62_03530
02035 Bacterial motility proteins [BR:
pds02035
]
CAY62_03530
Two-component system [BR:
pds02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
CAY62_03530
Bacterial motility proteins [BR:
pds02035
]
Flagellar system
Flagellar assembly proteins
Others
CAY62_03530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_2
Mg_chelatase
MerR
AAA_16
HTH_20
AAA_19
HTH_24
MCM
AAA_3
PDE8A_N
FleQ
AAA_18
DUF2089
HTH_23
Sigma70_r4_2
HTH_11
HTH_28
AAA_7
HTH_17
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ARR48728
LinkDB
All DBs
Position
I:768049..769509
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AA seq
486 aa
AA seq
DB search
MNQTCVLVVEDDDGLREALIDTLALAGYNWLEANSAEQALLMLKEQSVDIVVSDVQMSGM
NGLSLLRSIKLTYPKLPVILMTAFANIEDAVIAMREGAVDYMSKPFAPEVLLNLVGRYAP
IKNDLGRAIVADEKSKRLLNLAEKVAKTDANVMVLGPSGSGKEVMSRYIHEHSLRCDGPF
IAINCAAIPENMLEATLFGYEKGAFTGAVQACPGKFEQAQGGTILLDEISEMDLSLQAKL
LRVLQEREVERLGSRKSIKLNVRVLATSNRDLRQYVEQGQFREDLYYRLNVFPITWPPLA
ERLGDIAPLAQFFAERHCIKQGLPVPHVSECAIKKLCCYNWPGNVRELDNVIQRALILCE
EKITHDHILLEGVDWLDADCLQQAICQQQQVSELSESGLTSDQTAKSVEPEPEDTKKPED
NSKKMIVSCADGLGNELREQEFSIIFDTLMACDGKRKDVAERLGISPRTLRYKLAKMRSA
GIEIPV
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaacttgtgtgcttgttgttgaagacgatgatggcctacgtgaagcgctgatt
gatacattagcgcttgctggatacaactggttagaagccaatagcgcagaacaagcttta
ttgatgctaaaagagcaatcggtggatattgttgtctctgatgttcagatgtcgggtatg
aatggcctcagtttactccgtagcatcaagcttacttatccaaaactccccgtgattttg
atgacagcttttgccaacattgaagacgcggttatcgcaatgcgtgaaggggctgtagat
tatatgtctaagccatttgcccctgaagtactgcttaatttagttggccgttatgctcca
atcaaaaatgatttaggccgagctattgtggctgatgaaaagagtaaacgcttactgaat
ttagcagaaaaagtagcaaaaactgatgccaatgtgatggtgttaggccctagtggttct
ggtaaagaggtgatgtcgcgttatattcatgaacactctttacgttgcgatggtccattt
atcgcgattaactgtgctgctattcctgaaaatatgcttgaagctacactgtttggttac
gagaaaggtgctttcactggggcagttcaagcgtgtccgggtaaatttgaacaagcacaa
ggtggcaccattttgctcgatgaaattagtgagatggatttaagtttacaggcgaagtta
ttgcgcgtactgcaagagcgagaagttgaacgccttggtagtcgtaagagcatcaaacta
aatgtacgtgttcttgccaccagtaaccgagatttacgccaatatgtagagcaaggtcaa
tttcgagaagacttatattaccgattgaacgtattcccaattacttggccgccactggct
gagcgcctaggtgatattgcaccattagcccaattttttgccgaacgccactgcataaaa
cagggcttaccggttccccatgtttctgaatgtgcgataaaaaaactgtgttgttataac
tggcccggtaacgttcgtgaactcgataatgtgattcaacgggctttgatcttgtgtgaa
gagaaaattacccatgatcatattcttcttgaaggggttgactggcttgatgcggattgc
ctgcagcaggcgatttgtcagcagcaacaagtctctgaacttagtgagagcgggttgaca
tcagatcaaacagcaaaaagtgttgaacccgagcctgaagacactaagaaaccagaagat
aatagcaagaaaatgatcgtgagttgtgccgatggtttagggaatgaattgagagagcaa
gagttctctattattttcgacaccttgatggcttgcgatggtaagcgtaaagatgtagca
gaacggttagggattagcccgcgtacacttcgttacaaactggcgaagatgcgcagtgct
ggcatcgagatcccagtttag
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