Photobacterium damselae subsp. damselae: CAY62_04140
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Entry
CAY62_04140 CDS
T04927
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pds
Photobacterium damselae subsp. damselae
Pathway
pds00020
Citrate cycle (TCA cycle)
pds00190
Oxidative phosphorylation
pds00650
Butanoate metabolism
pds00720
Other carbon fixation pathways
pds01100
Metabolic pathways
pds01110
Biosynthesis of secondary metabolites
pds01120
Microbial metabolism in diverse environments
pds01200
Carbon metabolism
Module
pds_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pds_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pds_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CAY62_04140
00650 Butanoate metabolism
CAY62_04140
09102 Energy metabolism
00190 Oxidative phosphorylation
CAY62_04140
00720 Other carbon fixation pathways
CAY62_04140
Enzymes [BR:
pds01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CAY62_04140
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
GIDA
Thi4
FAD_binding_3
FAD_oxidored
BEX
Motif
Other DBs
NCBI-ProteinID:
ARR48843
UniProt:
A0AAD3ZVU3
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All DBs
Position
I:898216..899982
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AA seq
588 aa
AA seq
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MSISVREFDAVVIGAGGAGMRAALQISEQGLKCALLSKVFPTRSHTVSAQGGITVALGNS
HPDNWQWHMYDTVKGSDYIGDQNAIEYMCLNGPKSVIELEKMGLPFSRFDNGTIYQRPFG
GQSKEFGGEQAARTAAAADRTGHALLHTLYQQNIKHKTTIFSEWYALDLVKNQDGAILGC
TALCMETGEICYFKSKATILATGGAGRIYASTTNAHINTGDGVGMALRAGVPMQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMVEIREG
RGCDGPWGPHIKLKLDHLGKEVLESRLPGICELSRTFAHVDPVKEPIPVIPTCHYMMGGV
PTQVSGQAIKQNVSGQDVDVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLG
ETLLAQTEARPATDSDIEASLSRLNRWNRTQQGEDPVQIRKDLQTCMQNSFSVFREGDAM
AEGLKELKQIRERLNEARLDDTSTEFNTQRIECLELDNLMETAMATAVAANYRTESRGAH
ARFDFPERDDENWLCHTIYNPETESMSQRAVNMTPIHREAFPPKVRSY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgagtatctcagttcgtgaatttgatgctgttgtgattggtgctgggggagcgggtatg
cgagcagcccttcagatatcagagcaaggtttaaagtgcgctttattatcaaaagtgttt
ccgacacgttctcataccgtttcagctcaaggcgggatcactgttgcattaggaaactct
catcctgataactggcaatggcatatgtacgatacggtaaaaggttctgattacattggt
gatcaaaatgccattgagtatatgtgtttaaatgggcccaaatcagtcattgagcttgag
aagatggggctaccattttctcgttttgataatgggactatttatcaacgtccatttggt
ggccaatccaaagagtttggcggtgagcaagcagctcgtacagcggcagccgcggatcgt
accggccacgccttacttcataccttgtatcagcaaaatattaaacataagacaacgatt
ttttcagaatggtatgcgcttgatctggttaaaaatcaagatggtgccattttaggctgt
actgctctttgtatggaaaccggtgagatttgctatttcaaatcaaaggccaccatttta
gcaactggaggcgcgggacgtatttacgcttcaacaaccaatgctcatattaatacaggt
gacggtgttggtatggcattgcgagctggtgtccctatgcaggatatggaaatgtggcaa
tttcacccaaccggtatcgcaggggctggagtgttagttacagaaggctgtcgcggtgag
ggtggttacctgctcaataaagatggtgagcgctttatggagcgttatgctcccaatgca
aaagatcttgccggtcgtgatgttgtcgcccgttctatgatggttgaaattcgagaaggt
cgaggctgtgatggcccatggggaccgcatattaagttgaaactcgatcacttaggtaaa
gaagttttggagtcgcgtttacccggtatttgtgaattatcgcgaacctttgcgcatgtt
gatccagttaaagagccgattccggtgattcctacctgccattatatgatgggaggcgtt
ccgacccaagtatcaggacaagccattaagcaaaatgtatcggggcaagatgttgatgtt
caaggcctatttgcttgtggtgaaatcgcatctgtctcggttcatggtgcgaatcgatta
ggtggtaactcactacttgatttggtggtgtttggtcgtgcaacagggctgcatttaggt
gaaaccttgctggctcaaacagaagctcgcccagctaccgactcagatattgaagcatcg
ttaagtcgattaaaccgttggaatcggacccaacaaggtgaggacccagttcagattcgc
aaagatctgcaaacgtgcatgcaaaatagcttctctgtttttagagaaggggatgctatg
gctgaagggctcaaagagttaaaacagatcagagaacgcttaaacgaagctcgtcttgat
gatacatcgactgaatttaatactcagcgaattgaatgcttagaattagacaacttgatg
gaaacagcaatggctaccgctgtggctgcaaattaccgaacagaaagtcgaggagctcat
gctcgttttgatttccctgagcgtgatgatgaaaattggctctgtcataccatttataat
cctgagactgaatcgatgtctcagcgcgcagtaaatatgacgccaattcaccgtgaagca
tttccaccaaaagtacgttcatattaa
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