Photobacterium damselae subsp. damselae: CAY62_04160
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Entry
CAY62_04160 CDS
T04927
Name
(GenBank) succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
pds
Photobacterium damselae subsp. damselae
Pathway
pds00020
Citrate cycle (TCA cycle)
pds00640
Propanoate metabolism
pds00660
C5-Branched dibasic acid metabolism
pds00720
Other carbon fixation pathways
pds01100
Metabolic pathways
pds01110
Biosynthesis of secondary metabolites
pds01120
Microbial metabolism in diverse environments
pds01200
Carbon metabolism
Module
pds_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pds_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CAY62_04160
00640 Propanoate metabolism
CAY62_04160
00660 C5-Branched dibasic acid metabolism
CAY62_04160
09102 Energy metabolism
00720 Other carbon fixation pathways
CAY62_04160
Enzymes [BR:
pds01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
CAY62_04160
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GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
ARR48847
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Position
I:905062..906228
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AA seq
388 aa
AA seq
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MNLHEYQAKQLFAEYGLPVPEGYACSTPQEAAEAAGKIGGEKWVVKCQVHAGGRGKAGGV
ELHETKEGIKTFSQQWLGKHLVTYQTDANGQPVSKILVEAASNIANELYLGAVVDRASQR
IVFMASTEGGVEIEKVAEETPELIHKTAIDPLVGPQAYQGRELAFKLGLTGDQIKQFTQI
FLGLGKMFTDYDLALLEINPLVITDDGNLLCLDGKINIDANALYRQPKLREMHDPSQEDE
REAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVGGGATKERVTE
AFKIILSDSNVKAVLVNIFGGIVRCDLIAEGIIGAIAEVGVKVPVVVRLEGNNAELGAAK
LAESGLNIIAATSLTEAAEKVVQAAEGK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgcatgaatatcaggcaaagcagctgttcgctgaatatggtctgcctgtccca
gaaggttacgcgtgtagtacaccacaagaagcggcagaagctgctggtaaaattggtggt
gagaaatgggttgtaaaatgccaggttcatgctggtggtcgaggaaaagccggtggtgtc
gagttacacgaaactaaagaaggcatcaaaacattttctcagcaatggctaggtaaacat
ttagtcacatatcaaacagatgctaatgggcaacctgtctcaaaaattctagttgaagca
gcatcaaatatcgccaatgagttgtacttaggagctgtggttgatcgcgcttctcaacgt
attgtatttatggcctcaacagagggcggcgttgaaattgagaaagttgcagaagagact
ccagagcttattcataaaactgcaattgatcctcttgttggtcctcaagcatatcaaggt
cgtgaattagcatttaagttgggtttaactggcgatcaaattaagcaatttactcagatc
tttttaggactaggtaaaatgtttacggattatgacttggcgcttcttgagattaacccg
ttagttattaccgatgacggcaacttattgtgtcttgatggtaagatcaatattgatgca
aacgccttgtaccgtcagcctaagttacgtgaaatgcacgatccctcacaagaagatgag
cgcgaagcgcatgccgctcaatgggagcttaactacgttgcactcgatggcaatataggt
tgtatggtaaatggtgcaggtcttgcaatggggacgatggatattgttaacctccatggt
ggacaacctgctaatttccttgatgttggcggtggtgcaactaaagagcgtgtaacagaa
gcgtttaaaattattctctcagacagtaatgttaaagccgtattggtaaatatttttggt
ggtatcgtccgatgcgatctgattgccgagggtattattggtgcaattgctgaagttggt
gtaaaagttccagtcgttgtacgtcttgaagggaataatgctgagctcggtgcggcaaaa
ttggccgagagcggattaaatattattgcagcaacatcactaacagaagcggccgaaaaa
gtggttcaagcagcggagggcaaataa
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