Photobacterium damselae subsp. damselae: CAY62_04255
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Entry
CAY62_04255 CDS
T04927
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pds
Photobacterium damselae subsp. damselae
Pathway
pds00061
Fatty acid biosynthesis
pds00071
Fatty acid degradation
pds01100
Metabolic pathways
pds01212
Fatty acid metabolism
pds02024
Quorum sensing
pds04146
Peroxisome
Module
pds_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CAY62_04255
00071 Fatty acid degradation
CAY62_04255
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CAY62_04255
09145 Cellular community - prokaryotes
02024 Quorum sensing
CAY62_04255
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pds01004
]
CAY62_04255
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pds04147
]
CAY62_04255
Enzymes [BR:
pds01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CAY62_04255
Lipid biosynthesis proteins [BR:
pds01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CAY62_04255
Exosome [BR:
pds04147
]
Exosomal proteins
Exosomal proteins of breast milk
CAY62_04255
Exosomal proteins of breast cancer cells
CAY62_04255
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
Motif
Other DBs
NCBI-ProteinID:
ARR48865
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All DBs
Position
I:924140..925834
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AA seq
564 aa
AA seq
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MDKVWLSRYPEDVPAEINPDMYSSLVDMFEQSVQKYADQTAFINMGQVMTFRKLEERSRA
FAAYLQNDLKLQKGDRVAVMMPNLLQYPIAIFGILRAGCVVVNVNPLYTPRELEHQLNDA
GAKAIVIVSNFAHTLEAVVKDTSVEHVILTRLGDQLSRPKGTLVNFVVKYIKKMVPKYHL
PHATSMRMALRKGRRMQYVKPFISGEDMAFLQYTGGTTGVAKGAMLTHHNMVSNVMQAKG
AYGPVLTEGRELIVTALPLYHVFALTVNCLLILEMGGQNLLITNPRDIPTFIKELQRYPF
TAITGVNTLFNTLVNNEDFHELDFSNLRLSVGGGMAVQRAVAEKWQNITGNYLLEGYGLT
ECSPLVAAYPYDLTQYNGSIGLPVPSTEVRLIDDEGNEVGMDGTGELQVRGPQVMKGYWQ
RPEATKEVLTDDGWLSTGDIVRFDDDGFMHIVDRKKDMILVSGFNVYPNEIEDVVALHGK
VMEVAAIGQAHDVSGEIVKLCVVKRDPSLTREELIAHCREHLTGYKIPKIVEFHEELPKS
NVGKILRRVLREESDKKLAEKTNA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
gtggataaggtttggcttagccgctatccggaagatgtaccggcagaaatcaacccagac
atgtattcatcattggttgatatgtttgagcagtcagtacaaaagtatgcagatcaaacc
gcgtttattaatatggggcaggtgatgaccttccgcaaattagaagaacgtagccgagca
tttgctgcttatttgcaaaatgatcttaaactacaaaaaggtgatcgtgttgcggtcatg
atgccaaatttactgcaatacccaattgctatttttggtattttgcgtgcaggttgtgtg
gttgtaaatgtaaacccactatacacaccgcgagaattagaacatcagttaaacgatgcg
ggcgcaaaagcgatcgttatcgtgtctaactttgctcatactttggaagctgttgttaaa
gatacaagcgttgagcatgttattttaacccgtttaggtgatcagctttctcgtcctaaa
ggtactttagttaactttgttgttaaatacatcaagaagatggtaccgaaatatcaccta
cctcacgcaacatctatgcgtatggctctacgcaaaggtcgtagaatgcagtatgtgaag
ccatttatctcaggcgaagatatggcatttttgcaatacaccggtggtacgactggggta
gcaaaaggagcgatgttaacgcatcataatatggtatcgaatgtgatgcaggctaaaggt
gcttatggtcctgtattaactgaaggtcgtgaactgattgtaacggctttacctctatat
catgtatttgcgttaaccgttaactgcttattaattctagaaatgggtggtcagaactta
ttgatcactaaccctcgtgatattccaacctttattaaagaactgcagcgttatccgttt
acagcaattaccggtgttaacacactctttaatacgttagtgaataacgaagatttccac
gagcttgatttctcaaaccttcgtctatcggttggtggcggtatggccgtacaacgcgca
gtcgcagagaaatggcagaatattacgggtaactacctattagaaggttacggtttaaca
gaatgttctccgctggtggctgcttatccatacgatctaactcaatataacggttcgatc
ggtctccctgttccttcaacagaagtacgtctaattgatgatgaaggtaacgaagtaggt
atggatggcacgggtgagctacaagttcgcggtccacaggtgatgaaaggttactggcag
cgtcctgaagcaaccaaagaagtgctaactgacgatggttggttatcaacaggtgatatc
gttcgcttcgatgatgatggtttcatgcacattgtggatcgtaagaaggatatgatttta
gtttctggctttaatgtctacccgaatgagattgaagatgtggttgctctacacggtaaa
gtgatggaagtggctgcaatcggtcaagctcatgatgtgtctggcgagattgttaagctt
tgtgtggttaaacgtgatccaagtttaactcgtgaagaattgattgcgcattgtcgagaa
cacttaacgggttataagatccctaaaattgttgaattccacgaagagctgccaaaatcg
aatgtaggtaaaatcttacgtcgagttctacgtgaagagtcagataaaaaactggcagaa
aagacaaacgcataa
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