Photobacterium damselae subsp. damselae: CAY62_04895
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Entry
CAY62_04895 CDS
T04927
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pds
Photobacterium damselae subsp. damselae
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pds03032
]
CAY62_04895
03400 DNA repair and recombination proteins [BR:
pds03400
]
CAY62_04895
Enzymes [BR:
pds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CAY62_04895
DNA replication proteins [BR:
pds03032
]
Prokaryotic type
DNA Topoisomerases
CAY62_04895
DNA repair and recombination proteins [BR:
pds03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CAY62_04895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Peptidase_M13_N
Motif
Other DBs
NCBI-ProteinID:
ARR48978
LinkDB
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Position
I:1059846..1062467
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AA seq
873 aa
AA seq
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MSDLAKEITPVNIEEELKGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMSKIAHELLADLEKDTVDYVPNYDGTEHIPAVLPTKIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLAYIDNEEITIDQLMEYIPGPDFPTAAMISGRKGIIDAYKTGRGKI
YMRSKAEIEADKNGRETIIVTEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVNHRREV
VTRRTIFELRKARDRAHILEGLALALANIDEIIELIRRAPTPAEAKAGLVARGWELGNVA
AMLERAGTDAARPDWLAEEFGIRDNLYYLTEQQAQAILDLRLHKLTGLEHEKILDEYKTL
LEEIAELLHILSSAERLMEVIREELELVKEQFNDARRTEITAATHDIDLEDLINQEDVVV
TLSHEGYVKYQVLTDYEAQRRGGKGKAATRMKDEDFIERLLVANTHDTILCFSTRGRMYW
LKVYQLPLASRTARGKPIVNILPLEENERITAILPVKEYEADKFVFMATADGTVKKTPLT
DFSRPRSAGIIAVNLRDEDTLIGVDITDGNNDIMLFSKAGKVVRFNEGQVRAMGRTAAGV
RGIKLAESDNVVSLIVPHNDGDVLTVTENGYGKRTELEEYPAKSRATQGVVSIKVSERNG
SVVGAVQVLDGDEFMMITNGGTLVRTRVAEVSRVGRNTQGVTLIRTTEDEKVVGLQRIDE
PDEDDIIEDAEITEVENTETPAADSEQGDSSEE
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcttgcaaaagagatcacgcccgtaaacattgaagaggagctgaaaggctca
tacctcgactatgcgatgtcagttatcgttggtcgtgctcttcctgatgtgcgtgatggc
ctaaagccagtacaccgccgcgttttattcgcgatgaatgtactgggcaatgactggaat
aaagcttacaaaaaatctgcccgtgtggtcggtgacgtaatcggtaaatatcaccctcat
ggtgatagtgctgtttatgacactatcgtacgtatggcacaaccgttctcacttcgttat
atgctggtggatggtcagggtaacttcggttctatcgatggtgactcggctgcggcaatg
cgttataccgaagttcgtatgtcaaaaattgcacacgagctgcttgctgaccttgaaaaa
gacacggttgattatgtacctaactatgacggtaccgagcacattccagcagtactacca
acgaaaattccaaacctgctggtaaatggttcatctggtatcgccgttggtatggcaact
aacattccgcctcataacctaggtgaagtcatcgatggttgtttggcttatatcgataat
gaagaaatcactatcgatcagttaatggaatacattcctggtcctgacttcccaactgcg
gcaatgatcagtggtcgtaaaggtatcattgatgcctataagactggtcgcggtaagatc
tacatgcgttcaaaagctgagatcgaagcagacaagaatggtagagaaaccattatcgtt
acagaaatcccatatcaggtgaacaaagctcgcttgattgaaaagattgctgaactggtt
aaagaaaagaaagttgaaggcatcagtgcactgcgtgatgagtctgataaagacggtatg
cgtattgttattgagtgtaagcgtgatgcagtgggtgaagtggttcttaacaacctttac
gcacaaactcagctacaaacaactttcggcatcaacatggttgcactggacaatggccag
cctaaactgttcaacctaaaagagatgcttaagtgcttcgttaaccaccgtcgtgaagtg
gtgactcgtcgtactattttcgaacttcgtaaagctcgtgaccgtgctcatatcttagaa
ggtttggctcttgctctggcaaatatcgatgaaatcatcgagcttattcgtcgtgcgcca
acaccagctgaagctaaagcaggccttgttgctcgcggttgggagctaggtaacgttgct
gcaatgcttgaacgtgccggaactgatgctgctcgtcctgattggcttgctgaagagttt
ggtattcgtgataatctgtattatttaacagagcaacaagcacaagcgattcttgatctt
cgtctgcataagctaaccggtcttgagcacgaaaagattcttgatgaatacaaaactcta
ttagaagaaatcgctgaattactgcatatcctgtcaagtgctgagcgcttaatggaagta
attcgtgaagagttagagctagttaaagagcagtttaatgatgctcgccgtactgagatc
acagcggcaactcacgatatcgatttggaagatttgatcaaccaagaagatgttgtagtg
actttatctcatgaaggctatgttaagtaccaagtactaaccgattacgaagctcaacgt
cgtggtggtaaaggtaaagcagcaactcgaatgaaggatgaagacttcattgaacgtctg
ctggttgctaatactcacgatactatcttgtgcttctcgactcgcggtcgtatgtactgg
ctgaaagtgtaccagttaccattagcaagtcgtactgcgcgtggtaagccgattgttaat
attcttcctcttgaagagaatgagcgtattaccgcaattcttccagttaaagaatacgaa
gcagataagtttgtcttcatggcaacggctgatggtacagttaagaagactcctctaact
gactttagccgtcctcgtagtgctggtattatcgcggttaaccttcgtgatgaagataca
ctgattggtgttgatatcacagatggtaacaatgacattatgctgttctctaaagcaggt
aaggttgttcgattcaacgaaggccaagtacgtgctatgggccgtaccgctgcgggtgtt
cgcggtatcaagctggcagagagcgacaatgtagtatctctgattgttcctcacaatgat
ggtgatgtattaactgtgactgaaaatggttacggtaagcgtacagagcttgaggaatac
ccagcgaagagccgtgcaactcaaggcgttgtatccatcaaagtttctgagcgtaatggt
tcagttgttggtgcagtacaggtacttgatggtgacgaatttatgatgatcaccaatggt
ggtactctggttcgtactcgcgtagccgaagtaagccgtgtgggtcgtaatactcaaggt
gtcactctgatccgtactacagaagatgaaaaagtagttggtctacaacgaattgatgag
ccggatgaagatgatatcatcgaagacgcagaaatcaccgaagtagaaaatacagaaaca
ccagctgcagattctgagcagggcgattcatctgaagaataa
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