Photobacterium damselae subsp. damselae: CAY62_06275
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Entry
CAY62_06275 CDS
T04927
Name
(GenBank) AAA family ATPase
KO
K11908
sigma-54 dependent transcriptional regulator
Organism
pds
Photobacterium damselae subsp. damselae
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pds03000
]
CAY62_06275
Transcription factors [BR:
pds03000
]
Prokaryotic type
Helix-turn-helix
Other families
CAY62_06275
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA_5
HTH_8
AAA_2
AAA_16
AAA
HTH_50
SMC_N
Motif
Other DBs
NCBI-ProteinID:
ARR49214
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All DBs
Position
I:1352418..1353920
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AA seq
500 aa
AA seq
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MKQWLTYTAEMIECRKCSELITFFQNVSVDQLAVAQCLVFYPSDDGRFLISDNGSEQWEV
DDFDHPFSHALHHAKPILLDLKKLHFWRRNSDFEHFSQQVSDDESLLVVPLPFQSHRVKA
VVGLIGNKQIINNILNDENWLKFSQVFISQWILLRELASKHRQELQLNKSITQLKSNKTN
KGRRDLSHHLIGSSPVMESLREQIAIAAQSSLTVLIQGETGSGKELVAKAIHTLSDRKDK
PFVAVNCAAIPENLLESELFGYEKGAFTGAISARKGLIAQADGGTLFLDEMGEMPLALQA
KLLRVLETLEYRPLGSNKELRSQFRLVAATHVNLRKNVNQGLFRQDLFYRLYQYPLDVPS
LSNRLNDIDELAEVFIDQYNQRENRHVLGFDTQTLTLLKTFEYPGNVRQLRSLVEYACVH
TDSNQFINEQALPKTDMSSEKLVSSLPFEEIDDLKLALEEYERKIICDRLTFFAGDRAKA
AESLGLPKRTLAHKCQKLEI
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagtggctaacttataccgcggagatgattgagtgtagaaagtgttcagaattg
atcactttcttccaaaacgtatcagtcgatcaactggctgtcgctcaatgtttggttttt
tatccgagcgatgacggccgtttcctgatttctgataatggctctgagcaatgggaagtg
gatgactttgatcatccattttcacacgcattgcaccatgctaaaccgatattgctagat
ttaaaaaaactacacttttggcgccgaaattctgattttgaacatttttcacaacaggtt
tccgatgatgaatcattattggttgtgccactaccgtttcagtcacatagagtaaaagcc
gttgttggacttattggtaataagcaaattattaataatattcttaatgatgaaaattgg
cttaaattcagtcaagtatttatttctcagtggattttattacgtgaattggccagtaaa
catcgtcaagagttacagctaaataaatctattacccagttaaagagcaataaaacaaat
aaaggtcggagggatttatctcatcatttaattggctctagtccagtgatggaatctttg
cgagaacagatagcgattgctgcgcagtcttccttaactgttttaatacaaggagaaacc
ggatctggtaaagaattggttgcgaaagccattcataccttatccgatcgaaaggacaaa
ccttttgtcgctgtaaattgtgccgcaatccctgaaaatttgctggaaagtgaattattt
ggctatgagaaaggagcatttacgggggccattagtgctcgaaaaggtctgatagcgcaa
gctgatggtggcactctgtttcttgatgaaatgggggagatgcctcttgcactacaagca
aaattattacgggtattagaaacgcttgaataccggcctcttggttcaaataaggaactg
agatcgcaatttcgcttggtagcggcaacccatgtcaacttaaggaaaaatgtcaatcaa
ggtttgtttcgtcaagacttgttttaccgactctatcagtatccgttagacgttcccagt
ttatccaatcgactgaatgatattgatgaattagcagaagtatttattgatcaatataac
cagcgtgaaaatagacatgttctgggctttgatacgcaaacattgacgctgcttaaaaca
tttgaatatccgggtaatgtgcgtcaactgcgttccttagttgagtatgcgtgtgttcat
accgattcaaatcaatttattaatgagcaagccttaccgaaaactgatatgagctcagaa
aagttggtgagtagtctgccgtttgaagagattgacgatcttaaattggcccttgaagag
tatgagcgaaagatcatttgtgatcgcttaaccttttttgcgggagatagggcaaaagct
gctgaaagcctaggtttaccgaaacggactttagctcataagtgtcagaaattggagatc
tga
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