Photobacterium damselae subsp. damselae: CAY62_09200
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Entry
CAY62_09200 CDS
T04927
Symbol
oppD
Name
(GenBank) ABC transporter ATP-binding protein
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
pds
Photobacterium damselae subsp. damselae
Pathway
pds01501
beta-Lactam resistance
pds02010
ABC transporters
pds02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CAY62_09200 (oppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CAY62_09200 (oppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CAY62_09200 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pds02000
]
CAY62_09200 (oppD)
Transporters [BR:
pds02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
CAY62_09200 (oppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_29
DO-GTPase2
DUF87
nSTAND1
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
ARR49730
LinkDB
All DBs
Position
I:complement(2016812..2017783)
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AA seq
323 aa
AA seq
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MSLLDVKDLRVEFTTQDGIVTAVNDLNFSLNQGETLGIVGESGSGKSQTVFAIMGLLAKN
GKISGRAEFEGRNILNLPECELNKIRAEQIAMIFQDPMTSLNPYMKVSEQLMEVLMLHKG
MSKQQAFEESVRMLDAVKIPEARNRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPT
TALDVTVQAQIMELLNDLKQDFNTSIIMITHDLGVVAGSCDKVLVMYAGRTMEYGKINEI
FYQPGHPYTEGLLKAIPRLDTEGEMLPTIPGNPPNLLNLPVGCPYQERCHRVSARCHQEA
PILTPFADGRLRACFAEMEVASC
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagtttattagatgtaaaagatttacgcgttgagtttacgactcaagatggcatcgta
acggcggttaatgatcttaacttttctctaaatcagggcgaaacattaggcatcgttggt
gaatcaggctcaggaaaaagtcagactgttttcgctattatgggtctattggcaaaaaac
ggcaaaatcagtggccgagcagaatttgaaggtcgtaatattttaaatttgcccgagtgt
gagcttaacaaaatcagagcagaacaaattgcgatgattttccaagacccaatgacttcc
ttaaatccttatatgaaggttagcgagcagctgatggaagtcttaatgttgcataaggga
atgtcaaaacagcaagctttcgaagagtcggttcgtatgcttgatgcagtaaaaattccc
gaagcgcgtaaccgtataaccatgtatcctcatgagttttctggtggtatgcgtcaacga
gttatgattgccatggcgctattatgtcgaccaaaactactcattgccgatgagccaaca
accgctcttgatgtgacagttcaagctcaaattatggagttattgaatgatcttaaacaa
gattttaatacctcgattattatgatcactcatgatttgggggttgttgccggaagttgt
gacaaggtccttgtgatgtatgctgggcgtaccatggaatacggtaagatcaatgagatt
ttctatcaaccgggccatccatatacagaagggctactgaaagcgattcctcgtcttgat
actgaaggggaaatgctgccaaccattcctggtaatccgccaaacttattaaatttacct
gtcggctgcccatatcaagagcgttgtcatcgagtatctgctcgttgtcatcaagaagct
cctatattgaccccttttgcagatggtcgtttacgtgcatgttttgctgaaatggaggtg
gcatcatgctag
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