Photobacterium damselae subsp. damselae: CAY62_11615
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Entry
CAY62_11615 CDS
T04927
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pds
Photobacterium damselae subsp. damselae
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pds03016
]
CAY62_11615
Enzymes [BR:
pds01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CAY62_11615
Transfer RNA biogenesis [BR:
pds03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CAY62_11615
Prokaryotic type
CAY62_11615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ARR50753
LinkDB
All DBs
Position
I:complement(2497213..2498256)
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AA seq
347 aa
AA seq
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MDSFAYLYGKPEAKGLLKAQDSDFEVVEQLGYDFAGHGEHFMVLIRKSGENTKYVVNELA
KACGVKSRDVSWAGLKDRHAVTEQWLSVQLPGKSDPDLTDFVAEHPGIEVLATARHDKKL
RPGDLQGNRFTLRITELENCDELNARLEQIAQGGVPNYFGEQRFGHNGNNVVKARAWGND
EFRVRDKSKRSFYLSAARSWMFNQVLSQRIEQGKVSQLMLGDCLLAANDSRPMVVTEITP
ELEQQVASGELAISAPLLGDNELPTKADAQAFELTIVEQEPALVKLVRDNRMRHERRELL
LVPEQMTWQFDENTLTLSFSLPAGAFATAVIRELLDAREPEREFSHD
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggattcttttgcttatctttatggtaagccagaagcgaaaggtcttttaaaagcacaa
gacagtgattttgaagttgttgaacaattaggttatgactttgctggccacggtgagcat
tttatggtgctgatccgcaagagcggtgaaaacacaaaatatgtggtaaatgaactggca
aaagcatgcggtgtcaaatctcgtgatgtgagctgggctggtcttaaagatcgtcatgcg
gtaactgaacaatggctcagtgtacaactacctggcaaaagtgatccggatctgactgac
tttgttgctgaacacccaggtattgaggtgttagcaacagcccgacatgataagaaactg
cgcccaggtgatttacagggtaaccgcttcactttgcgtattaccgaattagaaaactgt
gatgaattaaacgctcgcttggagcaaattgctcaaggcggcgtaccaaactattttggt
gagcagcgttttggccataacggtaataacgtagtgaaagctcgtgcatggggtaatgat
gaatttcgtgttcgtgataaaagcaaacgcagtttttatctgtctgctgcccgttcatgg
atgtttaatcaggtgctatcacagcgtattgaacaaggtaaagttagccaactgatgtta
ggcgattgtctacttgctgctaacgatagccgtcctatggttgtgacagagataacgcct
gagttagaacagcaagtagcatctggtgaacttgctatttcagcgccactacttggtgat
aatgaattaccaactaaggccgatgctcaagcgtttgagttgactattgttgagcaagaa
ccagccttagttaagcttgtgcgtgacaatcgtatgcgccatgagcgccgtgagttactg
cttgttccagagcaaatgacttggcagtttgatgaaaatacactgacattatcatttagc
ttaccagctggagcatttgcaactgctgttattcgtgaattgcttgatgctcgtgaacct
gagcgtgagttttctcacgattaa
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