Photobacterium damselae subsp. damselae: CAY62_11655
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Entry
CAY62_11655 CDS
T04927
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pds
Photobacterium damselae subsp. damselae
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pds03009
]
CAY62_11655 (rumA)
Enzymes [BR:
pds01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CAY62_11655 (rumA)
Ribosome biogenesis [BR:
pds03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CAY62_11655 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
TRM5-TYW2_MTfase
MTS
RrnaAD
PCMT
Methyltransf_11
Cons_hypoth95
Methyltransf_23
PrmA
Methyltransf_15
DOT1
UPF0020
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
ARR50112
LinkDB
All DBs
Position
I:complement(2506490..2507815)
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AA seq
441 aa
AA seq
DB search
MARFFKPQKRKITDTKHKEITITRLDHLGAGIGHLNNKPVFVEGVLPGESAVVQFTEDKK
QYARARVIKRLTDSQARIKPQCPIYDQCGGCNLQHLSHQGQVTAKQQSLTELMTKFAGAD
QAITQVEPIVGPDTHYRRCARFGIRLDNRGQLQFGFRKKQSKEIVDVPQCMVLAQSLNEL
LPVLRELLNSLKGRKHLGHVELVEADNGRVVMIRHLQPFSDADMSKLLEFAKSQQIMLFM
APTADSIEQIFGDRPYYELDCQKLYFSPKDFIQVNRDVNIAMVKQAIDWLDVQADDRVLD
LFCGLGNFSLPLAKRANTLVGVEGVDEMVHRAQDNAQYNQINNAAFFQANLEQDVTEFSW
AKKPFNKILLDPARAGAAGVMEHVVKLAPEKVVYVSCNPATLARDSQILLHKGYQLTQLG
MMDMFPHTGHLESMALFVRSK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcttttttaagcctcaaaaacgtaaaattaccgatactaaacataaggaaatt
accattactcgccttgaccatctaggagcgggtatcggccatctcaacaataaacctgtt
tttgttgagggagtacttccaggtgaaagtgcggttgttcagttcactgaagataaaaag
caatatgcgcgtgcccgcgtgataaagcgtttaactgatagtcaggcgcgtattaaacct
caatgtcctatttatgaccagtgcggtggctgtaacttgcagcatttatctcatcaaggt
caggttacggccaagcagcaatcgttaactgagttaatgactaagtttgccggggctgat
caagcaattactcaagttgaaccgattgtcggtcccgatacgcactatcgccgctgtgct
cgatttggtatccggttagataatcgcggtcaattgcagtttggtttccgtaaaaagcag
agtaaagagattgtagatgtgccgcaatgcatggttcttgctcaatcactgaatgaactg
ttacctgtattgcgcgagctattaaacagtttaaaagggcgcaaacacttaggccatgtg
gaattggtagaagcggataatggtcgagtggtgatgattcgtcatctgcaacctttctct
gatgctgatatgagcaagctacttgagtttgcaaaatcccagcaaattatgttgtttatg
gccccaacagcagactcaattgagcagatttttggtgatcgcccgtattatgaattagac
tgccaaaagttatatttttcaccaaaagactttattcaagtcaatcgtgacgtcaatatt
gcaatggttaagcaagcaatagattggctagatgttcaagctgatgaccgtgtgttagat
ctattttgtggcttaggtaattttagtttaccgctggcaaaacgagcaaacacactggta
ggtgttgaaggtgttgatgaaatggttcatcgtgcacaagacaatgctcaatataatcaa
atcaataatgcggcttttttccaagctaacttagaacaggatgtgactgagtttagttgg
gcaaagaagccatttaataagattttactcgaccctgctcgtgctggcgctgcaggtgta
atggaacacgtagttaaacttgctccagaaaaagtggtctatgtgtcatgtaatccagca
acattggctcgtgatagtcagatacttttgcataaagggtatcagctaactcaattgggt
atgatggacatgttccctcacaccggacatttagagtcaatggcgttatttgttcgttct
aagtaa
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