Photobacterium damselae subsp. damselae: CAY62_12305
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Entry
CAY62_12305 CDS
T04927
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pds
Photobacterium damselae subsp. damselae
Pathway
pds00470
D-Amino acid metabolism
pds00550
Peptidoglycan biosynthesis
pds01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CAY62_12305
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CAY62_12305
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pds01011
]
CAY62_12305
Enzymes [BR:
pds01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
CAY62_12305
Peptidoglycan biosynthesis and degradation proteins [BR:
pds01011
]
Precursor biosynthesis
Amino acid ligase
CAY62_12305
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Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_9
DAO
Pyr_redox_2
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
ARR50219
LinkDB
All DBs
Position
I:complement(2627086..2628429)
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AA seq
447 aa
AA seq
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MKGLVDVNKVVVIGLGMTGLSVVNHLLRLPQSLDIKVIDTRNTPPGHDQLPADVELCCGQ
WNMEWLLAADLIVASPGIALATPELVTAAQAGVEIVGDIELFAREVTKPVVAITGSNGKS
TVTSLVGEMAKEAGIDVGVGGNIGFAALDMLAQNHELYVLELSSFQLETTSSLHLVAAVY
LNLSEDHMDRYQGLEDYSQAKMRIFHHANLAVYNRNDLATKPTDFTGAMTSFGFDDQDYG
LVLIDGREWLAINQQPLMPADEIALVGRHNVANSLAALALADAAGIDREAACRALRRYTG
LAHRCQLAVTKHGVRWVNDSKATNVASTEAALNGLNLAGKLHLLVGGDGKGADFSELKTV
LADLNVQLYCFGRDGYQFAELVDNAILVETMAQAMELAASTAQSGDMILLSPACASWDQF
ANFMARGDAFIELATELQDKVAGAASC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcttggtggatgtgaacaaggttgttgttatcggtcttggtatgacaggactg
tcggtggtaaatcatttgttaaggttgccgcaatcgcttgatatcaaagtgatcgacacg
cgaaacacaccaccaggtcatgatcaactgcctgccgatgttgagctgtgctgtggtcaa
tggaatatggaatggctattggctgccgatctgattgttgccagccccggtattgccttg
gcgacacctgaattggtcacagcggctcaagcaggcgttgagattgtgggtgatattgag
ctgtttgcccgtgaggtgacaaaacctgtggttgcgattactggttctaacggtaaaagc
acggtaacgagccttgtgggtgaaatggcaaaagaagcgggcattgatgtcggtgttggt
ggtaatatcggttttgctgcgcttgatatgctggctcaaaatcatgagctttatgttctt
gaattatccagttttcagttagaaacgacctcttcattacaccttgtcgccgctgtttat
ctaaatctttctgaagatcatatggatcgttatcaaggtttagaggattacagtcaggct
aagatgcgtattttccatcacgctaatctagccgtttataatcgaaatgacttagcgacc
aagccaaccgatttcacgggggctatgaccagttttggttttgatgatcaagattatggt
ttggtactgattgatggccgtgagtggttggcaatcaatcagcagcctttgatgccagcc
gatgagattgctctggttggtcgtcataatgtggcaaacagtcttgcagcattagctctg
gccgatgcagcaggaattgatcgcgaggccgcttgtcgtgctcttcgccgttatactggt
ttagctcatcgttgccaacttgccgtaactaagcatggcgttcgttgggtaaatgattcc
aaagcgactaatgttgccagcactgaagcggcacttaacggcttaaacttagctggtaag
ctgcacctattggtgggtggcgatggtaaaggcgctgatttttcggaactaaaaacggtt
ctcgctgacttaaatgtacaactttattgcttcggccgtgatggctatcaatttgcagag
cttgttgataacgcaatcttggttgaaactatggctcaagctatggagctcgctgcatct
accgcacaatctggcgatatgatcttgctttctcctgcctgtgcaagttgggatcagttt
gcaaacttcatggcccgaggtgatgcctttattgaacttgccactgagctgcaagataaa
gtagcaggagccgcttcatgctaa
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