Photobacterium damselae subsp. damselae: CAY62_12830
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Entry
CAY62_12830 CDS
T04927
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pds
Photobacterium damselae subsp. damselae
Pathway
pds03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CAY62_12830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pds03021
]
CAY62_12830
03400 DNA repair and recombination proteins [BR:
pds03400
]
CAY62_12830
Enzymes [BR:
pds01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CAY62_12830
Transcription machinery [BR:
pds03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CAY62_12830
DNA repair and recombination proteins [BR:
pds03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CAY62_12830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF4843
Motif
Other DBs
NCBI-ProteinID:
ARR50310
UniProt:
A0A1C3DQS1
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All DBs
Position
I:complement(2739176..2740165)
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVNSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVKVEGKDEVILTLNKSGAGPVVAGDITHDGD
VEIANPEHVICHITDDNAELSMRIKVERGRGYVPASARIHTEEDERPIGRLLVDATFSPV
DRISYAVEAARVEQRTDLDKLVIDMETNGTLDPEEAIRRAATILAEQLDAFVDLRDVRVP
EEKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaacagaatttcttaagccacgtttagttgacatcgaacaagttaac
tcaacgcatgcaaaagtaactctagagccattagagcgtggttttggccacactctaggt
aatgctcttcgtcgcattctattatcttcaatgccaggttgtgctgttactgaagtagag
atcgacggtgtgttacatgagtacagcaccaaagagggagttcaggaagatatcctcgaa
atcctactaaaccttaagggcctagctgttaaggttgagggtaaagatgaagtaattcta
actctgaacaagtctggtgcaggccctgttgttgcaggtgacatcacccatgatggtgat
gttgagattgcgaacccagaacacgtaatctgccacattactgatgacaatgctgaatta
agcatgcgcatcaaggtagagcgtggtcgtggctatgtaccagcatctgctcgtattcac
actgaagaagatgagcgtccaattggccgtctgctagttgatgcaactttcagcccagtt
gatcgtatctcttacgctgttgaagcagctcgcgttgaacaacgtactgacttagacaag
ctagtaattgatatggagactaatggtactcttgatcctgaggaagctatccgtcgtgca
gcaacaattcttgctgaacaactagatgcattcgtagatcttcgtgatgtacgtgttcct
gaagagaaagaagagaagccggagttcgatccgatcctactgcgtcctgtagacgatctt
gaactaactgttcgctctgcaaactgtctaaaagcagaagcgatccattacatcggtgat
cttgttcagcgtactgaggttgagcttcttaagactccaaaccttggtaagaagtcttta
actgaaattaaagacgttcttgcttctcgtggtctgtctctaggcatgcgtctagaaaac
tggccgccagcgtctatcgctgaagattaa
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