Photobacterium damselae subsp. damselae: CAY62_14080
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Entry
CAY62_14080 CDS
T04927
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pds
Photobacterium damselae subsp. damselae
Pathway
pds00071
Fatty acid degradation
pds00280
Valine, leucine and isoleucine degradation
pds00310
Lysine degradation
pds00362
Benzoate degradation
pds00380
Tryptophan metabolism
pds00410
beta-Alanine metabolism
pds00640
Propanoate metabolism
pds00650
Butanoate metabolism
pds00907
Pinene, camphor and geraniol degradation
pds00930
Caprolactam degradation
pds01100
Metabolic pathways
pds01110
Biosynthesis of secondary metabolites
pds01120
Microbial metabolism in diverse environments
pds01200
Carbon metabolism
pds01212
Fatty acid metabolism
Module
pds_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CAY62_14080
00650 Butanoate metabolism
CAY62_14080
09103 Lipid metabolism
00071 Fatty acid degradation
CAY62_14080
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CAY62_14080
00310 Lysine degradation
CAY62_14080
00380 Tryptophan metabolism
CAY62_14080
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CAY62_14080
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CAY62_14080
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CAY62_14080
00930 Caprolactam degradation
CAY62_14080
Enzymes [BR:
pds01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CAY62_14080
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CAY62_14080
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CAY62_14080
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
CAY62_14080
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DUF5101
Motif
Other DBs
NCBI-ProteinID:
ARR50525
LinkDB
All DBs
Position
I:2975305..2977485
Genome browser
AA seq
726 aa
AA seq
DB search
MIYQGETLYVDYIEPGIAELCLHASGSINKFDLATLESLNQALNALYQQPDLKGLLLTSS
KDSFIVGADITEFLGLFALSEPELLQWLNYANSIFNKLEDIPVPTVSAISGYALGGGCEC
VLACDFRIGTPTTKIGLPETKLGIMPGFGGTVRLPRLIGADSAMEIITTGKEQTASQALK
MGLLDAIVDTENLHQSALNLLHNAIDTTINWQPRRSQKQQPLALNHTEALMSFTTAKAMV
AKLAGPHYPAPMMAVKTIENAAQLSRAEALQIESTNFVKLAKSSEAQALIGLFLGDQKLK
AAAKKATKESSLIEHSMVLGAGIMGGGIAYQSAVKGIQVTMKDIAPASLDLGMTEVAKLL
NKRLERGRIDGLKMAQILGRINPTLSYPQQAPQIIVEAVVENPKIKMAVLQEVEAATPAT
TVLTSNTSTIPIDLLAQGLTRPEQFCGMHFFNPVHKMPLVEIIRGKATSEQTIQQVVSYA
KQMGKTPVVVNDCPGFFVNRVLFPYFAAFSQLVNDGIDFQRIDKIMERQFGWPMGPAYLL
DVVGIDTAHHAQAVMAEGYPDRMAKAHKDAIDVLFENKRFGQKNGSGFYNYQLDKKGKPK
KTRAPEVTQLLNSLCQQPLDLSDQQIMERMMIPMINEVVLCLEQHIIAAPADGDMALIYG
LGFPPFIGGVFRYLDNLGLDNYLRLTKQYQQLGALYSVPSSLQEMAKKQQIYYPKPNSTL
NLHTQG
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgatttatcaaggtgaaaccctctatgtggactacattgaacccggtattgctgaactg
tgtttacatgcttcaggctctatcaataaattcgatctcgccacattagaaagcttaaac
caagccctcaacgccctatatcaacaacccgacctcaaaggtcttttacttacctcaagc
aaagacagctttattgttggggctgatatcacagaatttctcggcctctttgcactatca
gaaccagagctgttgcaatggttgaattacgctaacagtatttttaataagcttgaagat
atccccgtgcctactgtgtctgccatctccggttatgcattaggtggtgggtgtgagtgt
gtattggcttgtgattttcgtatcggcaccccaacaaccaaaatcggtctacctgaaacc
aaattggggatcatgccagggtttgggggaaccgtgcgtttacctcgcttaattggtgct
gatagcgcaatggaaatcatcaccacaggaaaagagcaaacagcatctcaagcgctaaaa
atgggcctccttgatgctattgtggatacagaaaatctccatcaatcggcgctcaatttg
ctgcacaatgccattgatactacgattaactggcaacctcgccgtagtcaaaaacagcaa
ccactcgcgttaaaccataccgaagcactgatgagctttaccacagcaaaagccatggtt
gccaagctagcaggcccccactatcccgcacctatgatggcagtaaaaaccattgaaaat
gcggcgcaactcagccgagcagaagcactgcagattgagagcacaaactttgtaaaacta
gcgaaatccagtgaagctcaagcattaattgggctctttttaggagatcaaaaacttaaa
gcagcagctaaaaaagccactaaagaaagtagcttaattgaacatagcatggtgctaggt
gcaggtattatgggaggaggtattgcctatcagtctgcggtgaagggcatccaagttacc
atgaaagatattgcgccagcatcgctagatttagggatgacagaagtcgcaaaattactc
aataagcgcctagagcgaggccgcattgatgggctgaagatggcacaaattctaggtcgt
attaacccaaccttatcttatccacaacaggcacctcagatcatagttgaagcggttgtt
gaaaatcccaaaattaaaatggcagtattacaggaagttgaagcagctactcccgccaca
accgtactgacatctaatacttcaaccataccgattgatctgttagcgcaaggattaact
cgtccagaacaattttgtggcatgcatttcttcaatccagtacataagatgcccttagtt
gaaattattcgtggaaaggccacttcagaacaaaccattcagcaagtggtcagctatgct
aaacagatggggaaaacgcctgttgtcgtcaatgattgccctggatttttcgttaaccgc
gtcctgtttccttactttgccgcttttagccaattggttaatgacggcattgattttcag
cgtattgataaaattatggaacgccaatttggttggcctatgggtccggcttacttatta
gatgttgtcggtattgatactgcccatcatgcccaagcggtaatggccgaagggtatcca
gatcgaatggctaaagcacacaaagatgctattgatgtgctgtttgaaaataaacgtttt
ggacaaaaaaatggttctggattctataactatcaattagataaaaaagggaaaccgaag
aaaactcgagctcccgaagtcactcaattactcaactctctttgccaacaaccactcgat
cttagcgatcagcagatcatggaacgtatgatgatcccaatgatcaatgaagtcgttctg
tgtctggagcagcacattattgccgctccagccgatggggatatggcgctcatttatggt
ttaggatttcctccatttattggaggggttttccgctacctcgataacttaggcttagat
aattacttgcgcctcaccaagcaatatcagcaactgggggctctttactcagtacctagc
agtttgcaagagatggcgaaaaaacaacaaatctactatccgaaaccaaacagcacactg
aatttacacactcaaggatga
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