Photobacterium damselae subsp. damselae: CAY62_15025
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Entry
CAY62_15025 CDS
T04927
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pds
Photobacterium damselae subsp. damselae
Pathway
pds00061
Fatty acid biosynthesis
pds00071
Fatty acid degradation
pds01100
Metabolic pathways
pds01212
Fatty acid metabolism
pds02024
Quorum sensing
pds04146
Peroxisome
Module
pds_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CAY62_15025
00071 Fatty acid degradation
CAY62_15025
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CAY62_15025
09145 Cellular community - prokaryotes
02024 Quorum sensing
CAY62_15025
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pds01004
]
CAY62_15025
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pds04147
]
CAY62_15025
Enzymes [BR:
pds01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CAY62_15025
Lipid biosynthesis proteins [BR:
pds01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CAY62_15025
Exosome [BR:
pds04147
]
Exosomal proteins
Exosomal proteins of breast milk
CAY62_15025
Exosomal proteins of breast cancer cells
CAY62_15025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ARR51630
LinkDB
All DBs
Position
II:complement(47701..49350)
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AA seq
549 aa
AA seq
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MDQSLPYNMLIQWAEKKPNEVFLRQIINREFTDYTYADVLDKALRLVSCLRDMGIQPGDR
VALIAKNCAEWFITDLAMMLGSYISVPIFPTAGADTIEHCITHSESKIILIGKLDDEKAV
NSVCAKHAYIPTIGFNYSTAPKCQYQFDELIAKYEPSQERPQHSHEDIMSIVYTSGTSGL
PKGAMLSYGAFAWSSQRLIEHIGIKENERLFSYLPLAHITERVYIFGTSVQAGIQVAFPE
SLDTFIDDVKMHRPTLFISVPRLWTLFQQRIHEKLPPAKLNLLLKIPFISGLIKRKLADS
LGLDKARVLGCGSAPVSPALLEWYRHIGLNITEAWGMTESFAYSTLNYPFRADKIGSVGN
AGPGIEIKLTAEEEILVRGKGLFSGYYKNEEATKETIDEDGWLHTGDLGSIDEDGYITIE
GRIKDTFKTSKGKFVAPVPIEKRLFELSNLELMCIIGSGMPGPILLAVPHSFPNFDRARY
EKRVHKIIAKLNSELESHAQIRGVLMVKEPWSIENGILTPTLKIKRHILEKQYHEIGSNW
PKNTLIQWE
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggaccaatctttaccttacaatatgttaattcaatgggcagagaagaagcctaacgag
gtttttttacgtcagattattaatcgcgagtttactgattacacctatgctgatgtatta
gataaagcacttcgcctcgtatcttgtctgcgtgatatggggattcaacctggcgatcgt
gtggcattaatcgctaaaaactgcgctgaatggtttatcaccgacctagctatgatgctt
ggaagttatattagtgtccccatctttccaacagctggcgctgacacaatagaacactgc
attactcatagtgaatctaaaatcatccttataggaaaactagatgatgagaaagcggtt
aattcggtatgtgcaaagcatgcttacataccaacgatcggctttaattattctaccgca
cctaaatgccaataccaatttgacgaactcattgctaaatacgaaccaagccaagaaaga
cctcagcattctcatgaagacatcatgtctattgtctatacatctggaacctctgggcta
cctaaaggtgcaatgctaagttacggcgcatttgcctggtcttcacaacgtctgatcgag
catatcggtatcaaagaaaatgaacgcctattctcctatttacctcttgctcatattact
gaacgagtctacatattcggtacatcagtccaagcagggatccaagtagcatttcctgag
tcgttagatacgtttatagatgatgtcaaaatgcatcgcccaactctcttcatttccgtc
ccgagattgtggactctgtttcaacaacgtattcatgagaaactaccgcccgctaaactc
aacttattattaaaaattccatttatttcaggactcattaagcgaaaacttgctgatagt
ttaggcctagataaagcacgagttttaggttgtggctcagcccctgtatcacctgcttta
ctggaatggtaccgtcatattggacttaatatcaccgaggcttggggaatgacagagtct
tttgcctatagcaccttaaattatccatttagagcagacaaaattggttcggtaggtaat
gcgggaccaggaattgaaataaaactgacagctgaggaagaaattcttgttcgtggtaaa
ggattattcagtggctattacaaaaatgaagaagcaaccaaagaaaccattgatgaagat
ggttggcttcatacaggcgatttaggttctattgatgaagatggttacatcacaatagag
ggacgaatcaaagacacctttaaaacaagtaaaggcaaatttgtagcgccagtccctatc
gaaaagagactatttgaattaagcaacttagagcttatgtgtatcattggatctggtatg
ccaggaccgattttattagcagtccctcatagttttcctaattttgatcgtgctcgatat
gaaaaacgagttcacaaaataattgcaaaacttaatagcgagctagaatcccatgcccag
attcgaggggtactcatggtcaaagaaccatggagtatagaaaatggcattctaactcca
acattaaaaataaaacgacatattttagaaaaacagtatcatgaaattggcagtaactgg
ccaaaaaacacactaatacagtgggagtaa
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