Photobacterium damselae subsp. damselae: CAY62_16650
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Entry
CAY62_16650 CDS
T04927
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pds
Photobacterium damselae subsp. damselae
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pds03009
]
CAY62_16650
Enzymes [BR:
pds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CAY62_16650
Ribosome biogenesis [BR:
pds03009
]
Prokaryotic type
rRNA helicases
CAY62_16650
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_19
AAA_30
CMS1
AAA_22
SLED
P-loop_SecA
Terminase_3
Motif
Other DBs
NCBI-ProteinID:
ARR51094
LinkDB
All DBs
Position
II:complement(382756..384147)
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AA seq
463 aa
AA seq
DB search
MTQTSFATLNLHPDLLANLASLGYEKMTPIQAQSLPIILAGQDIIAQGKTGSGKTAAFGL
GLLNNLNVKRFRVQTLVLCPTRELADQVAKEIRRLARAIHNIKVLTLCGGMPFGPQIGSL
EHGAHIIVGTPGRVEEHLRKGNLSLDNLNTLVLDEADRMLEMGFQDAIDAVIDCAPKQRQ
TLLFSATYPTQIASIANSIMNKPAMVKVEATHDNSSISQHFYKVDNNEERMDAVRLLLAK
HHPESAVIFCNTKREAQEVADTLVDEGFSALALHGDLEQRERDRTLVRFANKSCSILVAT
DVAARGLDIDALDAVINYHLARDTEVHVHRIGRTGRAGSKGIACSLFSDKEHYKVALLED
YLDRPISGEALPDRSVLNQPPYRPAMVTLLIDGGKKQKVRPGDILGALTGGDKSIQGSQV
GKIHIFDYCAYVSVQRDIAKAALKKLENGKIKGRNFRARMIRG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
gtgactcagacttcatttgcaacattaaatcttcatcccgatcttttagctaacttggca
tcgctgggttacgaaaagatgacgcctattcaagcacaaagtttacctattattcttgcg
ggtcaagatatcatcgctcaaggtaagacgggctcgggtaaaactgcggcatttggtttg
ggtttgcttaataaccttaatgttaagcgttttcgtgtacagacattggttctgtgccca
actcgtgaactggctgatcaggttgctaaagagatccgtcgtttagctcgtgcaattcat
aatattaaagtactgacattgtgtggtggtatgccttttggtccgcaaattggctctctt
gaacacggtgcgcatattattgttggtacgccaggtcgagtagaagagcatttacgtaaa
ggtaacctttcgctagataatctaaatacattggttttagatgaagccgatcgcatgtta
gagatgggtttccaagatgccattgatgctgtcattgattgtgcaccaaagcaacgccaa
accctgctatttagtgcaacatatccaactcaaattgcttcgattgccaatagcattatg
aataagcctgcgatggtgaaagtggaagcgactcacgataacagcagtatctctcagcat
ttctataaagtagataataatgaagagcgtatggatgcagtgcgtttgttactggctaaa
catcatccagaatctgcggttattttctgtaatactaagcgagaagctcaagaagtggca
gatacgctggtagacgaaggttttagtgctctggcgctccatggtgatctggaacaaaga
gagcgtgacagaacattggttcgctttgccaataagagctgttctattttagttgcaacc
gatgttgccgctcgtggccttgatattgatgctcttgatgctgttattaactatcaccta
gcgcgtgatactgaagtgcatgtacaccgtattggtcgtacaggccgcgctggaagtaaa
ggtattgcgtgttcattatttagtgataaagaacactataaagtcgctttacttgaagat
taccttgatcgcccaatttctggcgaagcattacctgatcgaagtgtattaaatcaaccg
ccataccgtcctgcaatggtgacattattgattgatggtggtaaaaagcaaaaagttcgc
cctggtgatatcttaggcgcactaactggtggtgataagtctatccaaggcagccaagta
ggaaagattcatatctttgattactgtgcttatgtgtctgtacagcgtgatattgctaaa
gcagcactgaaaaaactggaaaatggtaagatcaaaggtcgtaacttccgagctcgcatg
attcgcggctaa
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