Photobacterium damselae subsp. damselae: CAY62_17480
Help
Entry
CAY62_17480 CDS
T04927
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
pds
Photobacterium damselae subsp. damselae
Pathway
pds00550
Peptidoglycan biosynthesis
pds01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CAY62_17480
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pds01003
]
CAY62_17480
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pds01011
]
CAY62_17480
Enzymes [BR:
pds01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
CAY62_17480
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CAY62_17480
Glycosyltransferases [BR:
pds01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CAY62_17480
Peptidoglycan biosynthesis and degradation proteins [BR:
pds01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
CAY62_17480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
ARR51234
LinkDB
All DBs
Position
II:complement(604082..606454)
Genome browser
AA seq
790 aa
AA seq
DB search
MTSNNSQSGLPEQDSQHTKQPSKLKKVLLRSLIAAALVGGAGAVYVGHQLNEIVTAKFSS
GQLWKLPSVVYARELTLQPGSPISYKNLLNELRVLHYTKVKKPDESGEYSANGWRIEFVR
RPFQFKEGAEGARDVAVTFDGNSIKQITDLDKNQELGFLRMDPKMLGMLESRTPEQRIYV
PADKMPKELVNGLIATEDRHFYEHDGISLVGIARAFIANIKAGHTVQGGSTLTQQLAKNM
FLSSERSLWRKAKEAYMAIIIDARYGKQEVLDAYMNQVYLAQNGNHGIHGFALASRYYFG
RPLSELRIDQMALMIGLVKGPSYYNPWRYPERAKERRNVVLKLMADNNVITQEQYQDAIK
LPLDIQAKGELSKRQPAYFGQIRAELEEKVGDAFKSGEGLRLFTSLDPQSQDAADQAVKK
MIPIIEKQRAGKDLETAMVIADRKTGEIRAMIGSSNPGYAGYNRAIDAQRQIGSVVKPAI
YLTALAQPEKYSLATTLEDKPLSIKLPNGDVWKPRNYSRTFSGQVPLFLALAKSMNVPTV
NLGMALGVENVIKTMVTLGVDANDIPDVPAILLGAVALSPLQVAQMYQTITNEGAKAPLT
ALNAVVDEKGDVLYQNWPKAAQVVPPQAAWLTTYDMQQVVKQGTARSLGRMYPNMHLAGK
TGTTDQGKDSWFVGADGREVVAVWMGRDDNKSANLTGSTGALRLYEDYIKRRGPEPLELR
LPANITGFNYDVMPDGTYQQSCTGTTRLPVWDPNNDLKIDCSVPVQQQVKEHVQEAQQQV
EGFFNRLFNW
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaaataattcacaatcaggactacccgaacaggatagtcaacatactaagcag
ccatcaaagctgaagaaagtattacttcgtagcttgattgccgctgcgcttgttggtggt
gccggtgctgtgtacgttgggcatcaactcaatgaaatagtgaccgctaagttttcatct
ggccagctgtggaagttgccatctgtggtgtatgctcgtgagctaacacttcagcctggt
tcaccaatttcttataagaacttacttaacgagttgcgcgtacttcactataccaaagtg
aaaaagccagatgagagcggtgagtattctgctaatggttggcgaattgagtttgtacgt
cgtccattccagtttaaagaaggggcagagggtgcgcgtgatgttgcagtaacctttgat
ggtaacagcattaagcaaatcactgaccttgataaaaatcaggaactgggcttccttcgc
atggatcctaaaatgctaggtatgctggagtcgcgtacccctgagcagcgtatttatgtt
cctgctgataaaatgccaaaagagctagttaacggcttgatcgcaacagaagatcgtcat
ttctatgaacatgatggtatttcgctggtgggtattgctcgtgcttttatcgctaatatt
aaagcgggtcatacggttcaaggtggtagtaccttaactcagcagctagcgaaaaatatg
ttcctatctagtgagcgtagtttatggcgtaaagcaaaagaagcgtacatggcgatcatc
attgatgcgcgttacggtaagcaagaagttcttgatgcctatatgaaccaagtgtatcta
gctcaaaatggtaaccatggtattcacggttttgctttagcgtctcgttactactttggt
cgtcctctatctgagctacgtatcgatcagatggctcttatgattggtctggtaaaaggg
ccttcatattataatccttggcgctatccagagcgtgctaaagagcgtcgtaatgttgtt
cttaagctgatggctgacaataatgtgattacccaggagcagtaccaagacgccatcaag
ctgcctcttgatattcaagctaaaggtgagctatcaaaacgtcagcctgcttattttggt
cagatccgtgcagagcttgaagaaaaggtaggtgatgcatttaaatctggtgaaggttta
cgtctattcacttctcttgatcctcagtcgcaagatgctgctgatcaagcggtgaagaag
atgattccgatcattgagaagcaacgtgcaggtaaagatcttgaaaccgcgatggtgatt
gctgatcgtaaaacgggtgaaattcgtgccatgataggcagtagtaatccgggttacgct
ggctataaccgagcaattgatgctcagcgccaaattggttctgtcgtaaaacctgcgatt
tatcttactgccttggctcagccagagaaatattcattggcaacaacgcttgaagataaa
ccactgtcgattaaattgccgaacggtgatgtatggaaacctcgtaactatagccgcaca
tttagtggtcaggttccattattcttggctttggcaaaatcaatgaacgtacctacggta
aacttaggtatggcattgggtgttgaaaatgtgattaagaccatggttactcttggtgtt
gacgcaaatgatattcctgatgtaccagctattttattaggtgctgttgctctgtctcca
cttcaagtggctcaaatgtatcagactatcaccaatgaaggggctaaagcgccattaacc
gcgctgaatgccgttgttgatgaaaaaggtgatgtactgtatcaaaactggccaaaagcg
gctcaagtagtaccgcctcaagctgcatggttaaccacttatgatatgcagcaagtagta
aaacaaggtacagctcgttcgttgggcagaatgtatccaaatatgcatctagctggtaaa
acagggacaacagaccaaggtaaagacagctggtttgttggcgcagatggccgtgaagtg
gttgctgtttggatgggacgtgatgataataagagtgcgaatctaactggttcaacaggt
gctctacgtctttatgaagattatatcaagcgtcgtggtccagagcctctagagctgcgt
cttcctgctaatattactggttttaattatgatgtaatgccagatggtacatatcagcaa
agttgtacaggtactactcgactacccgtttgggatccaaacaacgatcttaaaattgat
tgtagtgtgcctgttcaacaacaagtaaaagagcatgtacaagaagcacagcagcaagta
gaaggtttctttaaccgcttatttaactggtaa
DBGET
integrated database retrieval system
