Prevotella dentalis: Prede_0010
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Entry
Prede_0010 CDS
T02403
Name
(GenBank) TonB-linked outer membrane protein, SusC/RagA family
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
pdt
Prevotella dentalis
Brite
KEGG Orthology (KO) [BR:
pdt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdt02000
]
Prede_0010
Transporters [BR:
pdt02000
]
Other transporters
Pores ion channels [TC:
1
]
Prede_0010
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Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
CarboxypepD_reg
CooC_C
TTR_TEN1-4
DUF6795
Dioxygenase_C
Motif
Other DBs
NCBI-ProteinID:
AGB27416
UniProt:
L0JAT7
LinkDB
All DBs
Position
1:complement(15252..18434)
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AA seq
1060 aa
AA seq
DB search
MLCMSAMGGFAAFATPAMASVAQAPTIKVSGQVVDDQGEPLVGATIKVKGTKDGTVTDLD
GKFQLDAPANGTLVVSYVGYKDAEVAVRGRAIIEQIELSADNNVLDQVVVVGYGTQKKAD
LTGSVSIVNAEEMKKASNSNISTMLEGRVPGVQITTDGQPGADPTVRIRGIASFRDTAPL
YVVDGVPMGTTIRDFSPNDIATIQILKDAAAGAIYGSRAGNGVIIITTKNGRKDQPLKVD
YSGYFGVDNISRGVYDVMDANQYSQYIGQATANSNTPLPGGYSLDAATQRYRFMDNTNTD
WFGEVFKTGVRQNHNVNLSGGGAHNTFNVALDYFKQKGTLEGAGPNYERYTARVNNTMET
KFVKFRTSLVYSHSSQDGMGLSNASEYVQGLYGDVTNVLRGTLLMQPTIRAYDNSTWVLD
DRVGLASGYNYDAYGYGVYYDNIHGDISASNPLLVNNLLQRNTRVDRFVGTGSADVDLLK
MVGLGSKNHSLTYRLNLSYSMTHAKDRTWISAWAQSNRVYLDKSNERLTKASRDYTDALI
ENTLTYDGHIGKHNINFVLGQTYEEEHTDLLTGWGINLYEPYFLQVQHSAKRDAESYEYV
HTLTSFIGRLNYNYDEKYLFSAIIRRDGSSRLSKKKRWDTFPSVSLGWRFDKEKFFPISH
DVVNMFKLRASYGVLGNENIGEYQYQATMVRNNMTYSFGNTPVTGSAVSTFVNDNIKWEK
RKTTNVGLDLAMFNNRLEFTAEWYKNRSEDLLYGVPVPEQAGVSNTTVIMNAATMENSGF
EFSATYRNRDHALKYELSANLSTLKNKVVSLGFGTESYITGSYATYVGQEIGQFYGWVYE
GIARTKDDLANHATQQGANVGDCLYKDVSGPNGTPDGKIDEHDQVVLGSGLPKVNFGLNA
HLEYKNFDLSIATYGALNYHVSDDIYNSLNSCYGWGNKDVAVLDANRWSEDGQTYLSNVP
RTYATNNATLAWNDLFSSRKIQNAAYWKIANIELGYNFPDKWFGGIVSGVRAYVSAQNLY
TFTGYHGYNVDYAGGTFTPGYNFCSFPSARSFMCGLHFTF
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgctctgcatgagcgccatgggcggctttgcagcctttgccacgcccgcaatggcctct
gtggcacaggccccgaccatcaaagtgagcggccaagttgtggacgaccagggcgaaccg
ctcgtgggagccaccatcaaagtaaagggcaccaaggacggaaccgtgaccgacctggac
ggaaagttccagctcgacgccccggccaacggcacgctcgtagtgagctacgtgggctac
aaggatgcggaagtagctgtacgcggccgtgccatcatcgaacagatcgagctctcggcg
gacaacaacgtgctcgaccaggtcgtagtggtgggctacggaacgcagaaaaaggccgat
ctcaccggctccgtctcgattgtcaacgccgaagagatgaagaaggcctccaactccaac
atctctaccatgctcgaaggcagggtgccgggcgtgcagatcaccaccgacggccagccg
ggcgccgacccgacagtgcgcattcgcggcatcgcctcgttccgcgacacggccccgctc
tacgtcgtcgacggcgtgccgatgggtaccaccatccgcgacttctcgcccaacgacatc
gctaccatccagattctgaaagatgcagccgccggtgccatctacggttcgcgcgcaggc
aacggcgttatcatcatcaccaccaagaacggacggaaagaccagccgctcaaggtggac
tattcgggctacttcggcgtggacaacatctcgcgtggagtctacgacgtgatggacgcc
aaccagtacagccagtacatcggacaggccacggccaactccaacacgcctctgcccggc
ggctacagccttgacgccgcgacccagcgataccgcttcatggacaacaccaacaccgat
tggttcggcgaagtgttcaagacgggcgtgcgacagaaccacaacgtaaacctgagcggc
ggcggagcccacaacacattcaacgttgccctcgactacttcaagcagaaaggcaccctc
gaaggggccgggcccaactacgaacgctatactgcacgcgtgaacaacacgatggaaacg
aagttcgtgaagttccgcacctcgctggtctactcccactcctcgcaggacggcatgggc
ctctccaacgcgtcggaatacgtgcaaggcctctacggcgacgtgaccaacgtgctgcgc
ggcacgctcctcatgcagcccaccatccgtgcctatgacaactccacgtgggtgctcgac
gaccgcgtgggcctggccagcggctataactacgacgcttacggctacggcgtgtactac
gacaacatccacggcgacatctcggcctccaatccactgctggtgaacaacctgttgcag
cgcaacacgcgcgtggaccgattcgtgggtacgggctcggcagacgtggatctgctcaag
atggtggggctcggcagcaagaaccacagcctgacctaccgcctcaacctgtcttacagc
atgacccacgccaaggatcgcacctggatctcggcctgggcgcagagcaaccgcgtgtat
ctggacaagagcaacgagcgccttaccaaagcgagccgcgactataccgacgccctcatt
gagaacacgctgacctatgacggccatattggcaagcacaatatcaacttcgtgctgggc
caaacctatgaggaagagcacacagacctgcttaccggatggggcatcaacctgtacgag
ccctacttcctgcaggtgcaacacagtgccaagcgcgacgccgagtcctacgaatacgtg
cacacgctgacctcttttatcggtcgtctcaactacaactacgacgagaagtatctcttc
tcggccatcatccgccgcgacggcagctcccgcctgtccaagaaaaagcgttgggacacg
ttcccctcggtgtcgttgggctggcgtttcgacaaggaaaagttcttccccatcagccac
gacgtggtgaatatgttcaagttgagggccagttatggcgtgctgggcaacgagaacatc
ggcgaataccagtaccaagccaccatggtgcgcaacaatatgacctatagcttcggcaac
acacccgtcactggctcggccgtgtcgacgtttgtcaacgacaatatcaagtgggaaaag
cgcaagaccaccaacgtgggcctcgacctggccatgttcaacaaccggctggagttcact
gccgagtggtacaagaaccgctcggaagacctgctctacggtgtgcctgtgcccgagcag
gccggtgtttccaacaccacggtcatcatgaacgccgccaccatggagaacagtggcttc
gagttctcggccacctaccgcaaccgcgaccatgcgctgaagtatgaattgagcgccaat
ctgagcacgttgaagaacaaagtggtgtcgctcggcttcggtacagagtcttacatcacc
ggctcttatgccacctatgtggggcaggagatcggccagttctacggctgggtgtatgaa
ggcatcgcacgcacaaaggacgacctggccaaccacgccacccagcagggggccaacgtg
ggcgactgcctctacaaggacgtgagcggccccaacggcacacccgacggaaaaatagac
gaacacgaccaggtggtgctgggcagcggtctgcccaaggtgaacttcggcctcaacgca
cacctcgaatacaagaacttcgacctgagcatcgccacctacggcgcactcaactatcat
gtatcggacgacatctacaacagcctgaactcctgctacggctggggcaacaaggatgtg
gccgtgctggatgccaaccgctggtcggaggacgggcagacctatctgtcgaatgtgccg
cgcacctatgccacgaacaacgccacactggcctggaacgacctcttcagctcgcgcaag
attcagaacgccgcctattggaagatagccaacatcgaactgggctacaacttcccggac
aagtggttcggcggcatcgtctccggcgtgcgcgcctacgtgtcggcccagaacctctac
accttcaccggctaccatggctacaatgtggactatgccggcggaacgttcaccccgggc
tataacttctgctccttccccagtgcacgcagcttcatgtgcgggctccacttcacattc
taa
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