Prevotella dentalis: Prede_0384
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Entry
Prede_0384 CDS
T02403
Name
(GenBank) DNA-directed DNA polymerase III PolC
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pdt
Prevotella dentalis
Pathway
pdt03030
DNA replication
pdt03430
Mismatch repair
pdt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Prede_0384
03430 Mismatch repair
Prede_0384
03440 Homologous recombination
Prede_0384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdt03032
]
Prede_0384
03400 DNA repair and recombination proteins [BR:
pdt03400
]
Prede_0384
Enzymes [BR:
pdt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Prede_0384
DNA replication proteins [BR:
pdt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Prede_0384
DNA repair and recombination proteins [BR:
pdt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Prede_0384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
T2SSK
MIB_M1
OspE
Motif
Other DBs
NCBI-ProteinID:
AGB27765
UniProt:
L0J8D2
LinkDB
All DBs
Position
1:472633..476352
Genome browser
AA seq
1239 aa
AA seq
DB search
MEDFVHLHVHTHYSILDGQSKVPYLVDKAISDGMRGMAITDHGVMYGIKEFSDYCASVNK
RRKAEGLEPFKPVFGCEMYVAHRRKEDKDKNAGDNSGYHLIVLAKNYRGYKNLIKLVSRS
WVDGYYYRPRTDREDLERYHEGLIVCSACIAGEVPSKILKGDIAGAREACEWYHRVFGDD
YYLELQRHEVKDPSLRANREVFPLQQKANKVLIEFAREYGIKLMCSNDCHFEDQDTAEAH
DHLLCLSTGKDLDDPSRLVYTKQEWFKTRAEMNEVFGDMPEVMANTLEILDKVETYSIDH
GPIMPFFPIPESFGTEEEWRRRFSEQDLYHEFTTDENGEHPLPEAEAQGVIDRLGGYDRI
YRIKFEADYLAKLAYDGARKCYGDPLPENVREHINFELHVMKTMGFPGYFLIVQDFINAA
RNELDVWVGPGRGSAAGSVVAYCLGITRIDPLKYDLLFERFLNPDRVNLPDIDTDFDDDG
RGRVLRWVMDKYGEENCAHIITYGSMATKNSIADVARVERLPLDRANFLKKAIPDRLPDG
KKMNLSNAIAYTPELREAEASADSRERNTIKYAKQLEGTVRGTGIHACGFIICRNPISDW
VPVSTADDPDFPELKCAVTQYDGHVIETTGLIKMDFLGLKTLSELKEACKVIRKTTGDVI
DIEHIPIDDELTYQLYQRGQTVGTFQFESPGMQKYLRELHPTVFEDLIAMNALYRPGPMD
YIPDFIRRKNDPTLVTYDIPCMEKYLKDTYGITVYQEQVMLLSRQLANFTRGESDALRKA
MGKKKKAIVDAMKPKFLKQGEANGYDPKILEKIWSDWEKFASYAFNKSHATCYSWVAYQT
AYLKAHYPAEYMAALMTRRFSVITEITKLMEECKAMHIPTLGPDVNESYVEFGVNKKGEI
RFGLSAIKGMGAAAAEAIVREREANGPYKDIYDFAERVNLKDVNRKAFESLVFSGGFDCF
GLMREQYMAPNQRGEVFLDSLVRFGQQYQQDKAEAANSLFGGMVSDIPVAMPQPGQAEPW
SSIEKLGRERDLVGIYLSAHPLDEFALILNNLCNTSCPEAGSRENYEALSARQEITFGGI
VTNVNQRFNKRGEPFGIVTVEDFHGPGELALFGEEWGRWGSRLIEGSSVFITAKCGKRFA
NSQSYSMTIQNIEYLQTVKDDRIERFTINVKSKTIDETVVNDILSMVGGSVGKTSLYFNI
NDEENNTNVLLHARNRQIEVGKKLVEYVEEHDNMSYTVN
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggaagattttgtgcatttgcacgtacatacgcactattcgatactcgatggacagtct
aaagtgccctacttggtggacaaagccatcagcgacggcatgcgcggcatggccattacg
gaccatggcgtgatgtatggcatcaaggaattttcggactattgcgcctcggtgaacaag
aggcgcaaggctgaagggctggagccgttcaagcccgtcttcgggtgcgagatgtatgtg
gcccaccgccgcaaggaagacaaggacaagaacgccggcgacaactccggctaccacctt
atcgtgctggccaaaaactatcgcggttacaagaacttgattaagttggtgagccgctcg
tgggtggacggctactattaccgaccccgtaccgaccgcgaggatctggagcgttatcac
gagggtttgatagtgtgctcggcgtgtattgccggcgaagtgccttccaagatccttaaa
ggcgatattgccggagcgcgcgaggcctgcgagtggtaccatcgtgtgtttggcgacgac
tactatttggagctgcagcgtcatgaggtgaaagacccgtcgctgcgtgccaaccgggag
gtgttccccttgcagcagaaagccaacaaggtgctcattgagtttgcccgtgagtatggc
atcaagctcatgtgttccaacgactgccactttgaagaccaggacacggccgaggcccac
gaccacctgctctgtctctcgacgggcaaggaccttgacgacccctcacgactggtctat
accaaacaggagtggttcaagacgcgtgccgagatgaacgaggtgttcggcgacatgccc
gaagtcatggccaacacgctggaaatactcgacaaggtggagacctacagcatcgaccac
ggccccatcatgcctttctttcccattcccgagagctttggcacggaggaggagtggcgc
cgccgcttctcggagcaagacctctatcatgagttcaccaccgacgagaacggcgagcac
ccgctgcctgaggccgaggcccagggcgtgatagaccgactcggcggctacgacaggata
taccgcatcaagtttgaggccgactatctggccaagctggcctacgacggtgcacgcaag
tgttatggtgaccccctgcccgagaatgtgcgggaacacatcaattttgaactccacgtg
atgaagacgatgggtttcccggggtacttcctcattgtgcaggactttatcaatgccgcg
cgcaacgagctcgacgtgtgggtaggaccgggccgcggctcggccgccggctcggtggtg
gcctactgtctgggcatcacgaggattgatccgctcaagtatgacctgctgttcgagcgt
tttctgaaccccgaccgcgtgaacctgccggatatagacaccgactttgacgacgacggg
cgcggccgcgtgctgcgctgggtgatggacaagtatggtgaagaaaactgtgcgcatatc
atcacttatggcagtatggccaccaagaactccattgccgatgtggcacgtgtggagcga
ctgccgctggacagggccaacttcctgaagaaagccatccccgacaggttgcccgatggc
aaaaagatgaacctgtccaatgccattgcctatacgcccgagctgcgcgaggccgaggct
tcggccgattcacgcgaacgtaacaccatcaaatatgccaagcaattggagggaacggtg
cgcggtacgggcatccatgcctgtggtttcatcatctgccgcaaccctatcagcgactgg
gtaccggtgtctacggccgacgaccccgacttcccggagctgaagtgtgccgtgacccag
tacgacggacacgtgattgagaccactggacttatcaagatggactttctcgggctcaag
acattgtcggagctcaaggaggcctgcaaggtaatccgcaagaccacgggcgatgtcatc
gacatcgagcatatccccatcgacgacgagctcacctatcagctctaccaacggggccag
actgtcggcacctttcagtttgagtcgccgggcatgcagaagtatcttcgcgagctgcac
cccacggtgttcgaggatctgatagccatgaacgccctctaccgaccgggccccatggac
tatattcccgacttcatcaggcgcaagaacgatcccacactggtgacctatgatattccc
tgcatggagaaatatctgaaagacacctatggcatcaccgtttatcaggagcaggtgatg
ctgctctcacgtcagctggccaacttcacccgaggagagagtgacgccctgcgtaaggcc
atgggcaagaagaagaaggccatcgttgatgccatgaagcccaaattcctgaaacaaggc
gaggccaacggctacgaccccaagattctggaaaagatatggagcgactgggagaagttt
gcttcctacgctttcaacaagtcgcatgccacgtgctactcctgggtggcttaccagacg
gcttatctcaaggcccactatccggctgaatacatggccgcactgatgacgcgccgtttc
tcggtgattacggaaatcaccaagcttatggaggaatgcaaggccatgcacatacccaca
ctggggcccgacgtgaacgagagctatgtggagtttggtgtgaacaagaaaggagagata
cgctttgggctctcggccatcaagggcatgggagcggccgccgccgaagccatcgtgcgc
gaacgcgaagccaatggaccctacaaggatatttacgattttgccgagcgggtgaatctg
aaagatgtgaaccgcaaggctttcgagagtctggtcttcagcggcggcttcgactgtttc
gggttgatgcgcgaacagtatatggctcccaaccagcgcggggaagtgtttcttgacagt
ctggtgcgctttgggcagcaataccagcaggacaaggccgaggccgccaattcactcttt
ggcggtatggtgtcggacattcctgtagctatgccccagccggggcaggccgagccttgg
agcagcattgagaagctggggcgcgagcgcgacttggtgggcatttatctgtcggcacat
cctctggacgagtttgcccttatactcaacaacctgtgcaacacttcttgtccagaggct
ggcagccgtgagaactatgaggctttgtcggcccgtcaggagattactttcggcggtatc
gtgaccaatgtgaaccagcggttcaacaagcgtggcgaaccttttggtatcgttacggtg
gaagacttccatgggccgggcgagttggcgctctttggcgaagagtggggccgttggggc
agtaggctgatcgaaggcagctcggtgttcatcacagccaagtgcggcaaacgctttgcc
aacagccagagctacagcatgactatccagaacatcgaatatctgcaaactgtaaaagac
gaccgcattgagcggttcaccatcaatgtgaagagcaagaccattgacgagaccgtggtg
aacgacattctctcgatggtgggcggcagtgtgggtaagaccagtctctacttcaacatc
aacgatgaggagaacaataccaacgtgttgctccatgcccgcaaccgtcaaatagaggtg
ggaaagaagctcgtggagtatgtggaggaacatgataatatgagctataccgtgaattaa
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