Prevotella dentalis: Prede_0484
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Entry
Prede_0484 CDS
T02403
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pdt
Prevotella dentalis
Brite
KEGG Orthology (KO) [BR:
pdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdt03009
]
Prede_0484
Enzymes [BR:
pdt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Prede_0484
Ribosome biogenesis [BR:
pdt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Prede_0484
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
Methyltransf_15
N6_N4_Mtase
MTS
Methyltransf_11
TRM5-TYW2_MTfase
PabTrmU54_TRAM_dom
Motif
Other DBs
NCBI-ProteinID:
AGB27853
UniProt:
F9D0B1
LinkDB
All DBs
Position
1:complement(599248..600714)
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AA seq
488 aa
AA seq
DB search
MSRKNKKLPLLENVTIEAIAAEGKCLFHHEDLVVFVPFCVPGDVVDVQLTKKKHRYGEGR
VERMVTPSSIRATPACEHFGICGGCKWQNLPYETQLQAKQQQVFDQLSRIGKVDLPPFRN
IMGSVKTLEYRNKLEFGCCNKRWFTHEELQNPSLDLATNDNSAIGFHITGAFDKIYPIRK
CWLMDDLHNEIRNETERYAKETGMTFYDVRAQRGLLRSLMFRTSNTGEWMLLVQFHYDEA
GDEHRAHQLLQHLADRFPQISSLIYVDNQKGNDTIGDLELTTFKGNDFIYETMEDLKFKV
GPKSFYQTNTEQAYHLYCVARDFCFMPKSTPGATADSQHPSLIYDLYTGTGTIANFVAHR
ARKVIGIEYVPEAIDDARINSQINHIDNTEFYAGDMKNILTPDFVREHGRPDIIITDPPR
AGMHPDVVNVILGAAPRRIVYVSCNPATQARDLSLLDADYRVTAVQPVDMFPHTPHVENV
VLLQRRDV
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaaagaacaagaaattaccactacttgagaatgtcaccatcgaggccattgct
gcagagggcaagtgcctcttccaccatgaagacctggtggtattcgtgcctttctgtgtg
cccggcgacgtggtcgacgtacagcttaccaagaaaaagcaccgatatggtgagggccgc
gtggagcggatggtcacgccgagcagcatacgtgccactcccgcgtgcgagcactttggc
atttgtggcggatgcaagtggcagaatcttccttatgagacccaactccaagccaaacag
caacaggtattcgaccagctctcgcgtatcggaaaggtggacttaccccctttccgcaac
atcatgggctccgtgaagacgctggaatatcgcaataaactggagtttggctgctgcaac
aagcggtggttcacacatgaagaattgcagaaccccagcctcgatttggccacgaacgac
aattccgccattgggtttcacatcaccggagcctttgacaagatttatcccattcgcaaa
tgttggctcatggacgacctgcataatgaaatacgcaacgagacagagcgttatgccaag
gaaacgggcatgaccttttacgacgtgcgggctcagcggggattgctacgtagcctgatg
ttccgcacttcaaacacgggagagtggatgctactggtgcagttccactacgacgaggcg
ggcgacgagcaccgggcccaccaactgctgcagcatcttgccgaccggtttccccaaatc
agttcgcttatctatgtggataatcagaaaggcaacgacaccatcggcgatctggaactc
accactttcaaaggcaacgacttcatctacgaaaccatggaagacctgaaattcaaagtg
gggcccaagagtttctaccagaccaacaccgagcaggcctatcacctctattgcgtggcc
cgcgacttttgctttatgcccaaatcaacaccaggcgccacagcagattcgcaacaccca
tcgctcatctatgatctctatactggcacgggtaccattgccaactttgtggcccaccgg
gcacgcaaggtcatcggtattgaatatgtacccgaggccatcgacgacgcacgcatcaac
agccaaatcaaccatatcgacaacaccgagttctatgccggcgacatgaaaaatatcctc
acgcccgacttcgtccgggagcatggccgtcccgacattatcatcaccgacccgccacgg
gccggcatgcaccccgatgtggtcaatgtcattcttggagcagctccacgacgaattgtc
tacgtcagctgcaatccggccacccaagcccgtgacctgtctttgctcgatgccgattat
cgagtgacagccgtgcagccggtcgacatgttcccccatactccccatgtagagaatgta
gtattgctccagcggcgcgatgtatag
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