Prevotella dentalis: Prede_0533
Help
Entry
Prede_0533 CDS
T02403
Name
(GenBank) AMP-forming long-chain acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pdt
Prevotella dentalis
Pathway
pdt00061
Fatty acid biosynthesis
pdt01100
Metabolic pathways
pdt01212
Fatty acid metabolism
pdt02024
Quorum sensing
pdt04146
Peroxisome
Module
pdt_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pdt00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Prede_0533
00071 Fatty acid degradation
Prede_0533
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Prede_0533
09145 Cellular community - prokaryotes
02024 Quorum sensing
Prede_0533
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pdt01004
]
Prede_0533
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdt04147
]
Prede_0533
Enzymes [BR:
pdt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Prede_0533
Lipid biosynthesis proteins [BR:
pdt01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Prede_0533
Exosome [BR:
pdt04147
]
Exosomal proteins
Exosomal proteins of breast milk
Prede_0533
Exosomal proteins of breast cancer cells
Prede_0533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AGB27899
UniProt:
L0J9H1
LinkDB
All DBs
Position
1:complement(663281..664957)
Genome browser
AA seq
558 aa
AA seq
DB search
MRRNMENIPSFNRLIQKSIVENWERDALTDFKGATLQYHDVARKIEKLHIMFENSGVQKG
DKIALAGRNSAAWAAAFLAVLTYGAIAVPILHEFTADQIHNIVNHSDAKLLFVGDVVATE
IDATKMPKLEGIIYIPDYSLVLSRTDKLTYAREHLNEIFGKKFPKYFRKEHVNYYVEENP
NELALINYTSGTTGFSKGVMIPYRALWSNADFAEHVLGTQIHAEDSVISILPMAHMYGMA
FEFLFEFIKGCHIYYLTRIPSPAIIAQAFAEVKPKIIISVPLIIEKIIKKKVFPKMQDTK
IRILLKMPGINKRVYEKICEQVSKAFGGNFYEVIIGGAAFSQEVETFLHQIGFRYTVGYG
ATECAPIICYADHASFVPTSCGRAALHMQVKIASEDPARVPGEILAKGPNVMLGYYKNEE
ATEAAIDKDGWFHTGDLGTMDADGNVFIKGRSKNMLLGSNGQNIYPEEIEDKLNSMTMVT
ESVVIQDGDKLVGLVFPDYDAAKQMGFNNEDLKDIMEQNRKQINTVLPAYCHLSSIEIHE
EEFEKTPKRSIKRFLYTR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaaatatggagaatattccgagcttcaaccggctgatacaaaaaagtattgtg
gaaaactgggagcgagacgccctcaccgactttaagggagcaaccctgcagtatcatgac
gtggcacgcaagatagagaagctgcacatcatgtttgaaaactccggggtgcagaaagga
gacaagattgccctggccggccggaacagcgccgcgtgggccgccgctttcctggccgtg
ctcacctatggcgccatagccgtgcccatcctgcatgagtttacggccgaccagattcac
aacatcgtcaaccattccgacgccaagctgttgttcgtgggcgacgtggtcgccacggag
atagacgccaccaagatgcccaaactggagggcatcatctacattccggactactcgctg
gtgctgtcgcgcacggacaaactgacttacgcccgcgagcatctgaacgaaatcttcggc
aagaagtttcccaagtatttccgcaaggagcatgtgaactattatgtggaggaaaaccca
aacgagctggccctcattaactataccagcggtacgacgggcttttccaagggcgtgatg
atcccctaccgtgccctgtggagcaacgccgactttgccgaacacgtgctgggcacccaa
attcatgccgaagacagtgtcatcagcatcctgccgatggcccacatgtacggcatggcc
ttcgagttcctgttcgagttcatcaagggctgccacatctactacctgacgcgcatcccc
tcgccggccatcattgcccaggcctttgccgaggtgaagcccaaaatcatcatttccgta
cctctgattatcgaaaagatcatcaagaaaaaggtgttcccgaagatgcaggacaccaag
attcgcatcctgctgaagatgccgggcatcaacaaacgggtgtacgagaagatttgcgag
caagtgtcgaaagctttcggtggcaacttctacgaggtcatcatcggcggcgcggcattc
agccaggaggtcgagacattcctgcaccaaatcggattccgctacaccgtgggctacggg
gcaacggagtgcgcacccatcatctgctatgccgaccacgcctcgttcgtacccacgtcc
tgcggcagggctgccctgcacatgcaggtgaagattgcgagcgaagaccccgcaagggtg
cccggcgagatattggccaagggccccaacgtgatgctcggctattacaagaatgaggaa
gccaccgaggcagccatcgacaaggacggctggttccacacgggcgacctcggcacgatg
gacgccgacggcaatgtcttcatcaaaggccgctccaagaacatgctgctgggctcgaac
gggcagaacatctacccggaagagatcgaagacaagcttaactccatgaccatggtcacc
gagagtgtggtcatccaggatggcgacaagctggtgggactggtgttccccgactacgat
gctgccaagcagatgggattcaacaatgaggacctgaaagacatcatggagcagaaccgc
aagcaaatcaacaccgtcctgccggcctactgccatctttcgtccatcgaaatccatgag
gaagaattcgagaagacccccaagcggtcgatcaagcgattcctatacaccagataa
DBGET
integrated database retrieval system
