Prevotella dentalis: Prede_0576
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Entry
Prede_0576 CDS
T02403
Name
(GenBank) RagB/SusD family protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pdt
Prevotella dentalis
Brite
KEGG Orthology (KO) [BR:
pdt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdt02000
]
Prede_0576
Transporters [BR:
pdt02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Prede_0576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
AGB27935
UniProt:
F9D012
LinkDB
All DBs
Position
1:complement(708941..711082)
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AA seq
713 aa
AA seq
DB search
MKRFINILMTVAALGVTATSCSDFLEEDNKTGETADLTYNTSTGIDGLVSSAYAYSRGWW
GKEPSLGLAEMGSDLFYYGYDNKQKGLCSYDMTSESLGFESTSGTDAVNNNPCLDQYWEL
FYAGIDVSNNVLKYVVKNENLSDTKKQAYQGDAYFLRALYYAQLVALWGPVPYNGEAITA
LNYKPQRQPEPVIYKHILDDLKEAMNLYKSANVMTQANATGEGRAYYYSAVALYARVALY
AASWLGANSVEGYGNLYTEALQASTDVINNSGASLYNRYADTWNMNNEEHNSECLFRVHY
GNTLSSGFDNCVPYRYYKNGTGTFNSLLTRKGYSSNGGSATNLMFVSMWNNGATDLGGNG
QKTTNVFFRCTDAKKAYIKSATTNGNVEVGKYYSPYGRGFTRYLPSLYLWKILDEVKGTD
QRYNGTLLTSYRIPKELAGNAKNYPNMSDQEFVDYDDAYNTDGNYFNGGGAAIVYSLTDG
NSAEGQAEQAAAKNKYRIQFASGGDIPVYTSSDPAKALPTEAAKKVSDVYGDARYNSYKI
GGWCSFPGIKKFLDDQYDTNYPTFDVSYRDIMVLRLAEMYLIKAEAEMQTGANANALATI
NQLRTVRAISGKDNTISGTVTIETILKERALELCGEYQRWFDLKRTHTLLEHVKAYNAQA
SANVALKHYYRPIPLSELETVTNRSDESFNQDANGVLQYTAASANMWQNPGYN
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatttatcaatatattgatgacggttgccgccttgggtgtaacggcaacttct
tgctctgattttctggaggaagacaacaagaccggcgagactgccgacctgacctacaac
acctcaacaggcatcgacggcctcgtttcgtcggcttatgcctattcgcgcggctggtgg
ggcaaggagccttcgctgggattggcagagatgggctccgaccttttctattatggttac
gacaacaagcagaaaggtctttgcagttacgacatgacctcggagagtctggggtttgag
tcgacttcgggcaccgatgccgtgaacaacaatccctgccttgaccagtattgggaattg
ttctatgcgggcattgatgtcagtaacaacgtgctaaaatatgtggttaaaaacgagaac
ttgagcgataccaagaaacaggcctatcagggtgacgcctatttccttcgtgcgctctac
tatgcccagctcgtggccctctgggggcctgtgccctataatggcgaggccatcaccgct
ttgaattacaagcctcagcgtcagccggaacctgtgatttacaagcatatcctcgatgac
ttgaaagaggcgatgaacctttacaagtcggccaatgtgatgacacaggccaatgccacg
ggcgaaggccgtgcctattactattcggcagtggctctctacgcccgtgtggccctctat
gcggcttcctggctgggggccaacagtgtggagggctacggcaatctctataccgaagcg
cttcaggcatcgacggacgtcatcaacaactcgggtgcatcgctctacaaccgctatgcc
gacacgtggaatatgaacaacgaggagcacaactccgagtgcctgttccgtgtgcattat
ggcaacacattgtcgtcgggcttcgacaactgcgttccttatcgttattacaagaatggc
acaggcacctttaattcattgctcacccgcaagggatattcgagcaacggcggtagtgcg
accaacctgatgtttgtctccatgtggaacaatggtgccacggatttgggtggaaacggc
cagaagacgaccaatgtgttcttccgctgcacggatgccaagaaggcatatatcaagagt
gccactacgaatggcaatgtggaggtgggaaaatactactcgccctacggccgtggcttt
acccgttacctgccgtcgctctatctctggaagattctcgatgaggtaaagggcaccgac
cagcgatacaacgggacgttgctgacgagctatcgcattcccaaagaactggctggcaat
gccaagaactatcccaatatgagcgatcaggagtttgtggactatgacgatgcttataat
accgacggcaactacttcaatggtggaggtgctgccatcgtgtacagcctgaccgacggt
aattctgccgagggacaggccgagcaggctgccgccaagaacaagtatcgcatccagttt
gccagtgggggcgacattcccgtgtacacctcttccgatcccgccaaggccctgcctaca
gaggctgccaagaaagtgtccgacgtgtatggagacgcccgttacaactcttataagatt
ggtggatggtgctcgttccccggtatcaagaagtttttggacgaccagtatgatacgaac
tatcccactttcgacgtttcctaccgcgacatcatggtgctgcgcctggccgagatgtat
ctcatcaaggctgaagccgagatgcagacgggagccaatgccaatgcgttggccaccatc
aatcaattgcgcacggttcgcgccatcagcggcaaggacaataccatcagtggtacagtc
actatagagaccattctgaaagagcgtgcgctggagctctgcggcgaatatcagcgttgg
ttcgacctgaagcgcacccacacgttactcgagcacgtgaaggcttacaacgcccaggct
tcagccaatgttgccttaaagcattattatcgtcctattccgctcagcgaactggagact
gtgaccaatcgctcagacgagtcgttcaatcaagatgccaacggagtgctgcaatacaca
gcagcttctgccaacatgtggcagaatccgggctacaactaa
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