Prevotella dentalis: Prede_0742
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Entry
Prede_0742 CDS
T02403
Name
(GenBank) RNA polymerase sigma-70 factor, bacteroides expansion family 1
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pdt
Prevotella dentalis
Pathway
pdt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pdt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Prede_0742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdt03021
]
Prede_0742
Transcription machinery [BR:
pdt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Prede_0742
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
HTH_23
HTH_24
Sigma70_ECF
DUF2774
HTH_5
HTH_10
HTH_28
HTH_40
HTH_AsnC-type
HTH_VMAP-M9
HTH_11
NirdL-like_HTH
PF0610-like_N
HTH_Mga
DUF6362
HTH_68
Motif
Other DBs
NCBI-ProteinID:
AGB28096
UniProt:
F9CZI4
LinkDB
All DBs
Position
1:906702..907193
Genome browser
AA seq
163 aa
AA seq
DB search
MDIDAIFRTFYRPLCLYAMHYLAGNVELAEDIVQDCYVKLWQRRPEQPRSFLYTAVRNAC
IDELRRQKAAPPNVRPQDLDGYISDEEAQQRSVREAELWTAIDSLPERCRQIFLMSKRDG
MKYREIADELGLSEKTVEHQVSKALKRLKARRGELLFLATCLG
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atggatatagacgctatcttcagaactttttatcgcccactttgcctctacgccatgcac
tatctggccggcaacgtggagctggctgaagacatcgtgcaggattgctacgtcaagttg
tggcagcgcaggcccgagcagccccgcagctttctctacacggccgtgcgcaatgcgtgc
atcgacgagctgcggcgacagaaagccgccccgcccaacgtgcgcccgcaagacctcgac
ggctatatctctgacgaggaggcgcagcagcggtcggtgcgcgaggccgaactctggacg
gccatcgacagtctgcccgaacggtgccggcaaatcttcctgatgagcaagcgcgacggc
atgaagtatcgggagattgccgacgagctgggcctctcggagaaaaccgtggaacaccag
gtgagcaaagccctgaaacgactcaaggcacgccgcggggaactgttgttcctcgccacg
tgccttgggtga
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