Prevotella dentalis: Prede_1050
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Entry
Prede_1050 CDS
T02403
Name
(GenBank) RNA polymerase sigma-70 factor, bacteroides expansion family 1
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pdt
Prevotella dentalis
Pathway
pdt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pdt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Prede_1050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdt03021
]
Prede_1050
Transcription machinery [BR:
pdt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Prede_1050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
DUF5638
YgfK_N
DUF7716
MCH
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AGB28386
UniProt:
F9D244
LinkDB
All DBs
Position
1:1312668..1313201
Genome browser
AA seq
177 aa
AA seq
DB search
METITEDHFRQIFRNQYSALLNYALTLFADEEVKDIVQEAFVELWKRRDTLNDDDHIKAF
LYKTVYTRTLNMVRHRHIVQGYSEQKKQIENRRMKYYQPDQSDVMRHIESRELGRQIDTA
IDELPEKCRMAFTLSYLHGMKNKEISGVMKISVRTVDTHIFKALRYLRGRLGFLARE
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atggaaactataaccgaagaccatttcagacaaatattccggaatcagtattccgccctg
ctcaactatgccctgaccctttttgccgacgaggaggtgaaagacattgtgcaggaggcg
ttcgttgaactatggaaacggcgggacaccctgaacgacgacgaccatatcaaagctttc
ctgtacaagaccgtttacacgcgcacgctcaatatggtgaggcaccggcatatcgtgcag
ggatattcagagcagaaaaaacagattgagaaccgaagaatgaaatactaccagcccgat
cagagcgacgtgatgcgccacattgagagccgggaattaggacggcagatagacactgcc
attgacgaactgcccgaaaaatgtcgcatggctttcacgctgagctatctgcatggcatg
aagaacaaggaaatcagtggtgtaatgaaaatatctgttcgcacggtagatacgcacatt
ttcaaggctttgcgctacctgcgggggcgcctgggatttcttgcacgtgaataa
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