Prevotella dentalis: Prede_1643
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Entry
Prede_1643 CDS
T02403
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pdt
Prevotella dentalis
Brite
KEGG Orthology (KO) [BR:
pdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdt03016
]
Prede_1643
Transfer RNA biogenesis [BR:
pdt03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Prede_1643
Prokaryotic type
Methyltransferases
Prede_1643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
GTP_EFTU
RsgA_GTPase
Roc
ABC_tran
Ras
AIG1
ABC_ATPase
AAA_16
Arf
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AGB28947
UniProt:
F9D4P9
LinkDB
All DBs
Position
2:180073..181497
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AA seq
474 aa
AA seq
DB search
MINSDTIVALATPAGGAIGVLRLSGPDALTVTGRLFSPIKAGSTGDGAHQFDHARPNSLH
YGHLHTLDGEDIDDVMVCIYRAPHSYTGEDCTEISCHGSAYVLHEAIKACIDAGARQATP
GEYTQRAYLNGKMDLSQAEAVADLVSATNRATHKMALSQLKGHFSSELSLLREQLLKITS
LLELELDFSDHEELEFANRDELETLAVRIDHRITTLARSFETGNALKQGIPVAIVGKTNV
GKSTLLNRLLHEERAIVSDIHGTTRDVIEDSMTIQGIPFRFIDTAGIRTTCDKIEQLGIA
RTYQKLDEATIVLWLTDATPTPEEMADMQRRTHDKHLIMVRTKIDLHSPTPETTNATTSV
HSLSANKPGATIYISAKLGLGLDTLESALLQAADIPDINESSVIITSARHYEALSRAHDN
LSRVLQGMRSNFPTDLIAEDLRLVLDDLADITGRGRITPQETLHNIFSHFCIGK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgataaacagtgataccatcgtagcactggctacacctgcgggcggtgccattggcgtg
ttgcgcctcagcggccccgatgcccttacggtcaccggtcggctcttctcccctatcaag
gcaggttcaaccggagacggtgcccatcagtttgaccatgcccggcccaacagtctgcac
tacggacaccttcatacgctggatggcgaggacatcgacgacgtaatggtctgcatctat
cgtgccccgcacagctataccggcgaagactgtacggagattagctgccatggatcggcc
tatgtcctccatgaggccattaaggcctgcatcgatgccggagcacggcaggccactcct
ggagaatatacccagcgggcgtatcttaatggcaagatggacttgtctcaagccgaagct
gtggccgatttggtatcggcaaccaatcgggcaacgcataagatggcgcttagccagctg
aaaggacatttcagcagcgagctctccctcctgcgcgagcaactgctcaagatcacgagc
ctcctggagctagagctcgatttcagtgaccatgaagaactcgagtttgccaatcgggat
gaactcgagactcttgctgtcagaatagaccatcggataacgacccttgcccgctctttt
gagaccggcaatgcgctgaagcagggtattccggtggcaatcgtgggaaagaccaatgtg
ggaaagtcgaccctgctcaatcggttgcttcatgaggaacgggctatcgtcagcgacatc
cacggcacaacgcgcgacgtcatagaagattcgatgaccattcagggtattcctttccga
ttcattgatacggctggcatccgcaccacctgcgacaagatagagcaattgggcatagca
cgcacctatcagaaacttgacgaggccaccattgtactttggctcacagatgccactccc
actcccgaagaaatggccgacatgcaacggcgcactcatgacaagcaccttatcatggtg
cgaaccaaaatcgacctgcactcccctaccccggaaacaaccaacgctaccacttccgtt
cattctctctctgcaaataagcctggagcgactatttatatttctgcaaaacttggatta
gggctcgacactcttgaatcggctttactccaggctgccgacatccccgatattaacgaa
agtagcgttatcattacaagtgcccgccattacgaggctctttctcgtgcacacgataac
ctgtctcgtgtgcttcaaggcatgcgctcgaatttccctactgacctgattgccgaagac
ctccgtctcgtcctcgacgaccttgcagatataaccggtcggggccgcatcactccccag
gaaaccctccacaatatattttctcacttttgcatcggaaagtag
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