Prevotella dentalis: Prede_1741
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Entry
Prede_1741 CDS
T02403
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdt
Prevotella dentalis
Pathway
pdt03420
Nucleotide excision repair
pdt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Prede_1741
03430 Mismatch repair
Prede_1741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdt03400
]
Prede_1741
Enzymes [BR:
pdt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Prede_1741
DNA repair and recombination proteins [BR:
pdt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Prede_1741
MMR (mismatch excision repair)
Other MMR factors
Prede_1741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AGB29040
UniProt:
F9D4Z5
LinkDB
All DBs
Position
2:complement(301895..304468)
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AA seq
857 aa
AA seq
DB search
MQSEEQLLEQLNESQRAAVTYCDGPQLVIAGAGSGKTRVLTYKIAWLLAHYDMKPWNVLA
LTFTNKAAREMQSRIAQLVGGERARYLQMGTFHSVFSRILRVEADSIGYRSDFTIYDESD
SRSLIKNIVKSMGLEDKTYKPASVHAAISAAKNRLCMPEQYAEDGDLLARDRHHNMPETF
KIYASYQQRLRQANAMDFDDLLVNTFQMLRDHEPLRQKYAERFQYVFVDEYQDTNYVQQQ
IVTKLTRDHGRICVVGDDYQSIYAFRGAKIDNILNFNRIYPDARMFKLEQNYRSTQLIVA
AANSLMKHNSRQIPKEVYSRKEEGDKVTILETISDKREAAMVCREIRRIKNQEGCRWSDF
AILYRTNAQSRTFEEEMRKPEVGMGSHYRIYGGLSFYQRKEVKDVIAYFRLTVNPNDEEA
FRRIINYPARGIGDTTVQKIVRAAEQHEVSLWETIARPAAYGLDVNRGTLGKLAAFHALM
SGFMAKAQTTDALTLGDEIMVESGIKADLAADKTVEGDSRRQNIDALISGMADFVQAQRE
DDHADEARLQDYLATVSLMTDQDSDDGSDDKVTLMTIHAAKGLEFPTVFVVGMEENIFPS
TLSVSTPRELEEERRLLYVAITRAEKHCYLTWAHSRWLYGKMDSFVNPSRFINDIDPEFV
TVQTEGGRVGGNPFGEDRPRRRPWDEDKPARRRPWDDDYETDQPYTGARVWGGEYRRMSG
RMQNSRPVAGQFMADPKPKETAPHRPEQAVNPFSSSFEAKLRQSGKWQSVSRAMTGGGRA
EPGSASPVSAGAGSAPSASAGTGAGLHAGQVIEHQRFGRGTVVGVEGTGENRKATVDFDT
TGRKQLLLKFAKFTIVG
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtgaagaacaactgctcgaacagctcaacgaaagccagcgcgcggccgtgact
tattgcgacggcccgcagctcgtcattgccggagcagggtcgggcaagacgcgtgtgctc
acctacaagatagcctggctgctggcccactacgacatgaaaccctggaatgtgctggcc
ctcacctttaccaacaaggccgcccgcgagatgcagtcgcgcattgcacagctggtcggt
ggcgagcgggcccgctatttgcagatgggtacgttccattcggtattctcgcgcatcctc
cgtgtggaggccgacagcattggataccgcagcgatttcaccatctacgacgagagtgac
tcgcgttcgctcatcaagaacatcgtgaagtcgatggggctggaggacaagacctacaag
ccggcttccgtccatgcggccatctcggcggccaaaaaccggctgtgcatgcccgaacag
tatgccgaagacggcgacctgctggcccgcgacaggcatcacaacatgcccgagacgttc
aaaatctacgcatcgtaccagcagcgactgcgccaggccaacgccatggacttcgacgac
ttgctggtgaacaccttccaaatgctgcgcgaccatgagccgttgaggcagaaatatgca
gagcggttccagtatgtctttgtggacgaataccaggacaccaactacgtgcagcagcag
attgtgaccaagctcacccgcgaccacggccgcatctgcgtggtgggcgacgactatcag
agcatctacgctttccgtggggcaaagatagacaacatcttgaacttcaaccgcatctat
cccgacgcccggatgttcaagctggagcagaactatcggtccacgcagctcattgtggcg
gccgccaattcactgatgaaacacaactcgcggcagattcccaaggaggtgtacagccgt
aaggaggagggcgacaaggtgaccattctggaaaccatatccgacaagcgcgaggcggcc
atggtgtgccgggagattcggcgcatcaagaatcaggaggggtgccggtggagcgacttt
gctattctctaccgcacgaatgcgcagagccgcaccttcgaggaagaaatgcgcaaaccc
gaggtgggcatgggcagccactaccgcatctatggcgggctgagcttctaccagcgcaag
gaggtaaaggacgtgatagcctatttccggctgaccgtgaaccccaacgacgaggaggct
tttcgccgcatcatcaactatccggcgcggggaatcggcgacaccacggtgcagaagatt
gtccgtgcggccgagcaacacgaggtgagcctgtgggagacgattgcccgtccggccgca
tacggactggacgtgaaccgtggcacgctgggcaagctggccgccttccatgcgctgatg
agcggattcatggcgaaagcacagaccacggacgcgctgactttgggcgacgagatcatg
gtcgagagcggcatcaaggccgacctggccgctgacaagacggtggagggcgacagccgg
cggcagaacatcgacgcgctgatttcgggaatggccgattttgtgcaggcccagcgcgag
gacgaccatgccgacgaggcccggttgcaggactatctggccactgtttcgctgatgacc
gaccaggattcggacgacggctccgacgacaaagtgacgctgatgaccatccatgcggcc
aagggactggagttccccacggtgtttgtggtgggcatggaggagaacatcttcccgagc
acgctctctgtgagcacgccccgcgagctggaggaagagcgccgactgctctacgtggcc
atcacccgggccgagaagcactgctatctcacctgggcccactcgcgctggctttatggc
aagatggacagttttgtcaacccgagccggtttatcaacgacattgacccggagtttgtc
accgtccagacggagggcgggcgcgtcgggggcaatccctttggcgaagaccggccgcgc
cgtcgaccttgggacgaggacaaacctgcacgccgccgcccctgggacgacgactatgag
accgaccaaccctatacgggggcaagggtctggggaggcgaataccgccgcatgagcggg
cggatgcagaactcccgccctgtggccgggcagttcatggccgaccctaagcctaaggag
acggctccgcaccgccccgaacaggccgtcaatccgttctcttcgtcgtttgaggcgaag
ctccggcagagcgggaagtggcagagcgtgtcgcgtgccatgaccggtggcgggcgtgcc
gagccaggatctgcctctccggtttcggccggcgcgggttctgccccctctgcttcggcg
ggtacgggggccggactccatgcgggtcaggtcatcgagcatcagcgttttggccgtggc
acggtggtcggcgtggagggaacgggcgagaaccgcaaggccacggtggacttcgatacc
actggccgcaagcaactgctcctgaaattcgccaagttcaccattgtgggctaa
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