Prevotella dentalis: Prede_2279
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Entry
Prede_2279 CDS
T02403
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pdt
Prevotella dentalis
Brite
KEGG Orthology (KO) [BR:
pdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdt03016
]
Prede_2279
Enzymes [BR:
pdt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Prede_2279
Transfer RNA biogenesis [BR:
pdt03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Prede_2279
Prokaryotic type
Prede_2279
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AGB29545
UniProt:
F9D6R8
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All DBs
Position
2:1001894..1002808
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AA seq
304 aa
AA seq
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MEPFKIHILGCGSALPTLKHYASAQVVELRGKFFMVDCGEGTQMQLRRSHVGFTKIQAIF
ISHLHGDHCFGLPGLISTFGMLGRTAPLHVYGPAALGPMLDAVLRQFCTGLEFTVEFHAV
ATTRQQVVYDDRSLTVESVPLRHRIACCGYLFREKPTLPHIRRDMIDCFEIPLSQINNIK
NGAGWTTPDGLFIPHDRLTLPAAPPRAYAYCSDTRYMPTLHEAVEGVNLLYHESTYDAAH
ADRARLYHHSTSVQAATVARDAHVGRLLLGHFSARYDDETLLLREAQAVFPNTLLANEGL
VVSV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaaccattcaaaatacatattctgggctgcggcagtgcgctgcccacgctgaagcac
tacgcctccgcccaggtggtggagctgcgcggcaagttcttcatggtcgattgcggcgag
ggcacgcagatgcagctgcggcggtcgcacgtgggcttcaccaagatacaggccatcttc
atttcccatctgcacggcgaccactgcttcgggctgcccggcctcatctccaccttcggc
atgctggggcgcacggccccgctccacgtctacggcccggccgccttggggcccatgctc
gacgcggtgttgaggcagttctgcacggggctcgagttcacggtggagttccatgccgtc
gccaccacgcggcagcaggtggtctacgacgaccgcagccttaccgtggagtccgttccc
ctgcgccaccgcatcgcctgttgcggctacctcttccgcgagaagcccacgctgccccac
atccgccgcgacatgatcgactgcttcgagattcccctgagccaaatcaacaacatcaag
aacggggccggctggaccacacccgacggtcttttcatcccccacgaccggctcacgctg
cccgccgccccgccccgggcctatgcctattgcagcgacacgcgctacatgcccacgttg
cacgaggccgtcgagggcgtgaatctgctctatcacgagtccacctacgacgcggcccac
gccgaccgcgcccgcctctaccaccattccacgtcggttcaggcggccaccgtggcccgc
gacgcccacgtggggcggctcctcttgggccatttcagcgcacgctacgacgacgagacg
ctgctgctgcgcgaggcccaggccgtcttccccaacacgttgctggccaatgaggggctg
gtggtcagcgtgtag
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